Gene Patl_3106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_3106 
Symbol 
ID4174878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3738337 
End bp3738804 
Gene Length468 bp 
Protein Length155 aa 
Translation table11 
GC content44% 
IMG OID638056132 
Producthypothetical protein 
Protein accessionYP_662666 
Protein GI109899411 
COG category[S] Function unknown 
COG ID[COG3018] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.380867 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTATGA AGATATTAAG TATGACTTTA TTGGGCTTGA GCCTAATGCT TGGTGGCTGC 
TCATCAGTCT TTGATAAACA AGTTGAATGG GAAGTGGTGG AGCCGCAAGA TTACCCAGTG
CTATCAGCCA TTGGTTATGC GCCAATTAAA GGACAACGTG GCAATTCAGA CTCCACAAAA
ATGTTAATGG CGATCAAGGC CTCGAAACTT GATGCGTACC GCGAGCTCAC AGAGCAAGTG
TATGGCCAAA AAGTTGACGG CAGCCAAACG TTATCCAATT TTTTGTTGTC AGATGAGCGC
TTGTCGAGCT CAGTTCAAGG AGTTATTCGC GGTGCTCGCG TTATTAAAAG CTACCCGGTG
GGTGACGATC TGTATGCAAC AGAACTAGAG TTAGACTTTA AACGTGTTTA TGACATTTAC
CTTTCAACGG CGCGGCCAAA ACGAGTAAAG GATGTACATT ACTATTAG
 
Protein sequence
MIMKILSMTL LGLSLMLGGC SSVFDKQVEW EVVEPQDYPV LSAIGYAPIK GQRGNSDSTK 
MLMAIKASKL DAYRELTEQV YGQKVDGSQT LSNFLLSDER LSSSVQGVIR GARVIKSYPV
GDDLYATELE LDFKRVYDIY LSTARPKRVK DVHYY