| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3078 |
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| Symbol | |
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| ID | 4174850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3712127 |
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| End bp | 3712828 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056104 |
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| Product | acylneuraminate cytidylyltransferase |
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| Protein accession | YP_662638 |
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| Protein GI | 109899383 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1083] CMP-N-acetylneuraminic acid synthetase |
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| TIGRFAM ID | [TIGR03584] pseudaminic acid CMP-transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACCTCG CTATTATTCC TGCCAGAGGA GGAAGCAAAC GTATCCCTGG TAAGAACAGT
AAAATGTTCT GTGGTAAACC GCTAATCGCT TACTCCATCG AAGCGGCCAA AAATTCTGGT
TTGTTTGACA AGGTTATTGT TTCTACTGAC AGTCAGCACA TAGCGGATAT TGCGATAAAG
TGTGGCGCTG ACGTTCCATT TATGAGGCCA GAAAACCTCT CTGATGATTT CACTGGTACC
GTGCCCGTTG TTAAGCACGC AATAAAATTT GTTCAAGAGC AGGGCGAAGC GCCAAGTCAT
ACTTGCTGCA TATACGCTAC AGCTCCCTTC CTCCAAGTGA CTGCGTTAAA AGACGGGTTT
AAAAGGTTAA AAGCGGATGT TTCTAAGCAC TTTGCGTTTT CTGTTACCAG TTTTCCATTC
CCCATTCAGC GGGCATTAAA GATGCAAAAA GGGGGCGTGT GTCCTTTTAG TCCACAAGAC
ATCCCCAAGC GCTCACAAGA CTTAGAAGAA GCTTATCATG ACGCGGGGCA GTTCTATTGG
GGCAAAAGCG AAGCTTTTTT AAAAGGGATA CCTACATTTA GCGAAACGAG TATTCCTATT
GTACTACCTC GCCATTTAGT GCAAGACATT GATACACTTG AGGATTGGGA GCGCGCTGAG
TTAATGTATA AAGCGTACAT GCAATCACAA AAGGGGGAAT AA
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| Protein sequence | MNLAIIPARG GSKRIPGKNS KMFCGKPLIA YSIEAAKNSG LFDKVIVSTD SQHIADIAIK
CGADVPFMRP ENLSDDFTGT VPVVKHAIKF VQEQGEAPSH TCCIYATAPF LQVTALKDGF
KRLKADVSKH FAFSVTSFPF PIQRALKMQK GGVCPFSPQD IPKRSQDLEE AYHDAGQFYW
GKSEAFLKGI PTFSETSIPI VLPRHLVQDI DTLEDWERAE LMYKAYMQSQ KGE
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