| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3065 |
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| Symbol | |
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| ID | 4174837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3699060 |
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| End bp | 3699929 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 638056091 |
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| Product | glycosyl transferase family protein |
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| Protein accession | YP_662625 |
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| Protein GI | 109899370 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.807338 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTACTT TAGTTTCAGT TGTAATACCG GTTTATAATT CACAAAGTTA TATTGCAGAC
TGTATTGATT CGGTTCTGGC GCAAACTTAT CAAGATTTTG AAATAATTGT GATTGACGAT
GGATCTACAG ATAGCAGTTT AGACATTCTT AAATCCTATC AAAAAAAACA AAAAATCAAG
CTTTTGCAAA TTGAAAATTC TGGACAATCA GTGGCAAGGA ACTTGGGTAT TGAACAGGCC
ACAGGGAAAT ATCTAATTTT CATAGATAGC GATGATTGCT GGGAAAATAA TACCTTGGAA
GTCACAGTCG CATTGGCAGA GCAAAAGCAA TTAGATATGG TACTGTTTGA TGGGGAGTCT
TTTGTAGATG ATAAAGTTAC CGATGAGCAC ACCAGAGAAT GCCTTAATAC TTATTTAATC
CAAGGTTTCA AGCCAGACAC TTACGTGAGA AATGCGCCTG AAGATGTGTT TAGTGGTGGT
GAGTTTCTAG TTCAGCAAAT GAACAATAAT AAATTTATTG CGTCGCCAGT TTTGTATTTA
TACAAACTGG AAAAGTTTAA AAATATTCGA TTTGTACCCA ATATCATCCA TGAAGATAAT
GCCTTTAGCA TGGAACTATT GGTGAATGAT GGCCGGGTCA TGGCAATACC TAGTTCTTTA
TATCGTAGAC GTATTAGAAA AAATTCAATC ATGACCGCCC CCAAAACCAT GCAAAACGTT
AATGGCCATC TTGGTGTGTT AAAACGTATG GCAGAGGTGT TTAATCAGAC CGAGGATGCA
GAAATAAAAA CAATAATCAA CCGCGTTATG CGTATGACGT TGGCAAATTG TGCTAGATGC
TTAAAACAAA TAGATGATCA GCTAGGTTAA
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| Protein sequence | MSTLVSVVIP VYNSQSYIAD CIDSVLAQTY QDFEIIVIDD GSTDSSLDIL KSYQKKQKIK
LLQIENSGQS VARNLGIEQA TGKYLIFIDS DDCWENNTLE VTVALAEQKQ LDMVLFDGES
FVDDKVTDEH TRECLNTYLI QGFKPDTYVR NAPEDVFSGG EFLVQQMNNN KFIASPVLYL
YKLEKFKNIR FVPNIIHEDN AFSMELLVND GRVMAIPSSL YRRRIRKNSI MTAPKTMQNV
NGHLGVLKRM AEVFNQTEDA EIKTIINRVM RMTLANCARC LKQIDDQLG
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