| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3055 |
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| Symbol | |
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| ID | 4174827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3689985 |
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| End bp | 3690764 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 638056081 |
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| Product | cephalosporin hydroxylase |
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| Protein accession | YP_662615 |
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| Protein GI | 109899360 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG3510] Cephalosporin hydroxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.52398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATAAAC ATCAAAAATT TAAGCAAGAA GTCGCAAAAA ACATTCGTTC TTTAGGTGAA
AAACCGACTC TTAAAACTCA GTCATATGAG TGGATAAAAG ACACGGCTGC GGATAATTAT
ACCTATAACT TTAGTTGGCT TGGTAGGCCC ATTATACAGG TTCCTCAAGA TATCGTTGCG
ATGCAGGAGC TCATTTGGGA AATAAAACCA GACTTAATTA TTGAAACAGG CATAGCTCAT
GGTGGATCAA TCATATTCAG CGCCTCAATG TTAGCCCAAC TCGATATGTG TGAAGCTATT
CAATCTGGGC AGACAATTGA TCCAAAAAAA TCCAAACGTA AAGTGTTAGC CATTGATATA
GACATCCGTG AGCATAATCG TGATGCTATT GAGTGCCACC CTATGGCATC ACGAATTGAA
ATGATCCAAG GGTCGAGTAT TGACCCGGAT ATTGTTAATA CAGTCAAAAC ATTCGCTAAA
CAATATTCAC GAATAATGGT CTGCCTCGAT TCCAATCATA CTCATGAGCA TGTGCTTGCT
GAGTTAGAAG CCTATGCAAA TCTAACCAGT GTGGGCAGTT ATTGTGTTGT TTTTGATACT
GTAATTGATG ATATGCCTGA AAATATGTTT CCAAACCGTC CTTGGGGTCC GGGAAACAAT
CCTAAAACAG CGGTATGGGA GTACCTGAAA TCACACCCTG AGTTTGAGAT TGATAAGAGT
ATTCACGATA AGTTATTGAT CACTGTTGCG CCCGACGGTT TCTTAAAACG CACCAAATAA
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| Protein sequence | MDKHQKFKQE VAKNIRSLGE KPTLKTQSYE WIKDTAADNY TYNFSWLGRP IIQVPQDIVA
MQELIWEIKP DLIIETGIAH GGSIIFSASM LAQLDMCEAI QSGQTIDPKK SKRKVLAIDI
DIREHNRDAI ECHPMASRIE MIQGSSIDPD IVNTVKTFAK QYSRIMVCLD SNHTHEHVLA
ELEAYANLTS VGSYCVVFDT VIDDMPENMF PNRPWGPGNN PKTAVWEYLK SHPEFEIDKS
IHDKLLITVA PDGFLKRTK
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