Gene Patl_3054 details

Gene Information

• Locus tag: Patl_3054
• ID: 4174826
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 3689153
• End bp: 3689950
• Gene Length: 798 bp
• Protein Length: 265 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 638056080
• Product: hypothetical protein
• Protein accession: YP_662614
• Protein GI: 109899359

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTAA AAAATGTTAA ACACTGCGCT AAGGCTGAGA ATTTTTTAGA AGAATTAACT 
GCAATGGTAG TTAATCGTTC TATAGAAGTT AGTGTCAAAA ACAACAACCC ATTACCAAAA 
GTGTTTTACA TTGGCATTGG AAAAACAGGT TCGAGCTCGA TAAAAAAATA TATAAATGAA 
ACTGTGGCTC ATTGGCATGA CGAGAGCTAT TTTGAAGAAA TTTATCAAAC TGACTTGTTG 
ACAAAAAATA ACCTTTGTTT GTACGACTTG ATCTTATACA TGGGCAAACA ATATAAGTTT 
AAACCTTTAA TTATTGAAAC ATATAGAGAG CCGGTAGCTA GATCTATTTC TGGGTTAGCC 
CACAGAAACC GTATTTCAGA ACTCTCAACA ACAAACTATG AAGAATTTAA AAATAGGATA 
ACGGTTGATT TCATCACATT AACCAGCCAA CCATATAGCT TAAAATGGAA GTCTTATTTT 
TCTGTCGATT TAATTGCCGA ATTTAGTAAA ACCACAAATT ACTTTTACAA AGAATTAACT 
GACATTAAAT TATTATTTCT AAAGCTCGAA GATGTGAAAA ACTGGCCACT CATTATTAAA 
GTCGCCGGCT ATCATTATGA AAACATCATT TCTAATGATG CAACTAAATC AAAGTTTCGT 
GATTTATATT CAGAAGTGAT GGCTAAATTT AGGTTGTCTG AAAAAGACCT CAATAAGATT 
TACCACAATA ATTTGATTAA ATCTTTTTAT ACCCAAAACG AAATTAATTC ATTTAAAAAA 
AAGTGGGGAA AAAACTGA 

 

Protein sequence

MNLKNVKHCA KAENFLEELT AMVVNRSIEV SVKNNNPLPK VFYIGIGKTG SSSIKKYINE 
TVAHWHDESY FEEIYQTDLL TKNNLCLYDL ILYMGKQYKF KPLIIETYRE PVARSISGLA 
HRNRISELST TNYEEFKNRI TVDFITLTSQ PYSLKWKSYF SVDLIAEFSK TTNYFYKELT 
DIKLLFLKLE DVKNWPLIIK VAGYHYENII SNDATKSKFR DLYSEVMAKF RLSEKDLNKI 
YHNNLIKSFY TQNEINSFKK KWGKN