Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3045 |
Symbol | fliH |
ID | 4174817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3675637 |
End bp | 3676437 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638056071 |
Product | flagellar assembly protein H |
Protein accession | YP_662605 |
Protein GI | 109899350 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGATT ACGATGGTGA GCAAGACAAA CACATTAGCG CTTGGGATTT GCCTTTCGTT GAAGATGAGC GTAAGGCAGT TGAAACCACG ACTAATGCGT TAAATCGACG TTCGAACTGG AAATACGAAC CCCCTGAAAA TCAAGTAGAA GAAGAGGAGG AGTTCGCGCC CCCTACCGCT CAAGAAATCG AATCCATTCG AGAGGCTGCT CAAAGTGAAG GGTTTGAAGA AGGCAAAAAA GAGGGCTTAG AAAAGGGTCA TCAAGAAGGG TTTGAACAAG GCAAAGAACA AGGCTCGGCG CAGGGACTTG AAGAAGGTAA AACCCAAGGA TTAGCCGAGG CTCAAGAAAG TGTTAATCAA CAATTAGAGA GCTGGCGCAG CCTGTTAGAC ACCTTGCACA ACCCGGTCGC GTTGGTAGAA GAGACACTGC AGAAAGAACT TGTTTCGTTG GCCGTATCCC TAGCGAAATC AGTGATTAGG GCCGAAATTA AAACTAACTC AGATATTATT TTTAATGCGA TTAGTGAAGG GCTAAAAGCG CTACCGATTA ATGAGCGCCA GTATCAAATT CACCTTCATC CAGATGATTT AGTGTTGGTG ACTGAGCACT TTAGTGAGCA AGAAATTGAG AAACACGGAT GGCAGTTAAT TGAAGCGCCC AATTTATCTC AAGGTGGCTG CGACATCGTG ACACAAAGCA ATGCGGTAGA TGTAAGCATA GAGCGTCGCG TTAAAGACGT GCTCGACAAG TTTCTGCTAG AGCAGGGCTT AGATACTATT AATGCTAGCG AAGACGAGTA G
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Protein sequence | MNDYDGEQDK HISAWDLPFV EDERKAVETT TNALNRRSNW KYEPPENQVE EEEEFAPPTA QEIESIREAA QSEGFEEGKK EGLEKGHQEG FEQGKEQGSA QGLEEGKTQG LAEAQESVNQ QLESWRSLLD TLHNPVALVE ETLQKELVSL AVSLAKSVIR AEIKTNSDII FNAISEGLKA LPINERQYQI HLHPDDLVLV TEHFSEQEIE KHGWQLIEAP NLSQGGCDIV TQSNAVDVSI ERRVKDVLDK FLLEQGLDTI NASEDE
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