Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3039 |
Symbol | fliN |
ID | 4174811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3669143 |
End bp | 3669538 |
Gene Length | 396 bp |
Protein Length | 131 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 638056065 |
Product | flagellar motor switch protein |
Protein accession | YP_662599 |
Protein GI | 109899344 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
TIGRFAM ID | [TIGR02480] flagellar motor switch protein FliN |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGAAG AAGAAGGTTT AGATGATTGG GCAGCGGCCA TGGCTGAACA AGCAGATGAA GAAAGCAAAG ACGGTAACGC TACTGTTGCC GAATATGACG AGCTTGAAGA AGACAAAGAG ATATCCCCTG CGGAAAAGCG CAAGTTAGAT ACGATTTTGG ATATTCCTGT GACTATTTCT ATGGAAGTAG GACGTAGCCA TATCAGTATT CGCAATTTAT TGCAGTTGAA CCAAGGTTCT GTCGTTGAGT TAGACCGTGT CGCAGGTGAG CCACTTGATG TGTTAGTAAA TGGCACGTTG ATTGCTCATG GTGAGGTAGT AGTCGTCAAC GATAAATTTG GTATTCGCTT AACTGATGTT ATTAGTCAAC TGGAAAGAAT CAAAAAGCTC CGCTAA
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Protein sequence | MSEEEGLDDW AAAMAEQADE ESKDGNATVA EYDELEEDKE ISPAEKRKLD TILDIPVTIS MEVGRSHISI RNLLQLNQGS VVELDRVAGE PLDVLVNGTL IAHGEVVVVN DKFGIRLTDV ISQLERIKKL R
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