Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_3027 |
Symbol | |
ID | 4174799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3657084 |
End bp | 3659348 |
Gene Length | 2265 bp |
Protein Length | 754 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638056053 |
Product | CheA signal transduction histidine kinases |
Protein accession | YP_662587 |
Protein GI | 109899332 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0643] Chemotaxis protein histidine kinase and related kinases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGTTTG ATGTTGACGA GGAGATCCTT CAGGATTTTT TAGTAGAAGC GGGTGAAATA CTAGAGCAGC TTCAAGAACA GCTGGTTGAG TTGGAAAATA ATCCGCAAGA TTCGGATTTA CTGAATGCGA TTTTCAGAGG CTACCACACG GTTAAAGGTG GCGCGGGCTT TCTTTCGTTA ACCGAATTAG TCGATATTTG TCACGGCGCT GAAAACGTAT TCGATGTCAT GCGTAACGGC CAACGTTCAT TAACGCCAGA GTTAATGGAT ATTATTCTTC AAGCAACCGA CGAAGTCGTC GCCATGTTTG AAGATGTAAA ATCGAACAAA CCCTTGGTAG CAGCAGAGCA ATCGTTATTA GATACATTGC ATCGCCTGAG TAAGCCAGAG GCGCAAGACC AAGTTGCTGC GCCTCCAATT ATCGAAACGC CAGTAATCGA GGCGCCCAGT GAAGCGGCAT CTCAGCCTAA AACAAATTCG GATGACTTTG ACGAATCCGA GTTTGAGGCC TTGCTTGATG AACTTCACGG TGAAGGTAAT CCCGTTGGAG GAGCATCGCA ATCACCATCA ATTAAGCCGC CACAATCCAC AGAGTCTTCC AGTGGCGCTG ATATGAGTAG TGATGGTGAC GATATTAGTG ATGATGAGTT TGAAGCGTTA CTCGATCAGC TTCATGGAGA AGGGCAGTTT GGCGGCTCTC AAGACGCTCC CTCTGAATCG ACTGACGCGC CCGTAGCAAG CACAAATTCT GAATCAGAAG ATATCAGTGA TGATGAATTC GAAGCGTTAC TCGATCAGCT CCATGGTAAA GGGCAAGGGC CTGTTACCAA AAAAGAAGCT AACGGAGAAA CAAGTAAAGC GCCAAACACT CCAGTAACGT CGGCAGTATC TGATAACACG CCGTCGCAAT CCGCAAGTGA AAAAGCCACT GATAAAAGTA ACGACACTAA GTCGAGTGCG CCCAGCATTG CCTCTAGCCA AGCCAATATA CCTGCTAAAA GCCCTGGGGC GGCGGAAAAG TCGGCTGTTT CTAAGCGTGA GGAAAAGCGT CCCGCAGCAC CACAGCCGGA AACGACGGTT AGGGTGGATA CCAAGCGCTT AGACCAAATC ATGAATATGG TAGGTGAGTT GGTATTAGTG CGTAACAGGT TGCTTAGTTT AGGTTTATCC GTCAACGACG AAAGTATGTC AAAAGCGATT GCTAATTTAG ACGTGGTCAC CGGCGATTTG CAAGGCGCCG TGATGAAAAC GCGCATGCAG CCCATCAAAA AAGTGTTTGG GCGTTTTCCT CGAGTCGTGC GTGACTTAGC GCGCACCTTG AAGAAAGAAA TTACCCTTGA ACTAGAGGGT GAAGAAACAG ATTTAGACAA AAATTTAGTC GAGGCCCTTG CTGATCCTTT GGTGCATCTA GTACGAAATT CAGTGGATCA TGGTATAGAA ATGCCAGCGG ATCGGGTCGC AGCGGGCAAG CCATCTTTAG GTACGGTAAA GCTATCAGCT TCTCAAGAAG GTGATCATAT TTTGCTGAGC ATAGTCGATG ACGGTAAAGG CATGGACCCT GATAAGCTTA AAGAAATAGC TATTTCTCGA GGCGTATTAG ATGCTGATGC CGCGGCTCGA ATGACAGATG AAGAAGCATT CAATTTAATT TTCGCTCCGG GTTTCTCGAC CAAAACTGAA ATATCCGAAG TGTCAGGCCG CGGCGTTGGT ATGGACGTGG TGAAAACCAA AATTAACCAG CTAAATGGTA CGGTCAATAT CGATTCTGTG CTGGGCAAAG GCACCACGCT AGAAATTAAA GTGCCACTGA CTTTGGCAAT ATTACCGACT CTTATGATAG TGGTTGGCGA TCAAACCTTC GCATTACCAT TAGGCTCGGT AAACGAAATT ATCAACATGG ATATGAGTAA AACCAATACA GTTGATGGCC AATTAACAAA AATCGTTCGT TCCAAAGCGA TCCCATTATT CTATTTACGC GAGTGGTTAG TACGCAAAAA TGCTAAGCCA ATCCCGCTAG ATCGCGCTAA GGGACATGTT GTTGTCGTGC AAATTGGTAC CCAGCAACTC GGTTTTGTGG TTGATGCGCT CATCGGTCAA GAAGAAGTGG TGATTAAGCC ATTAGATGAA TTGCTACAAG GTACTCCTGG CATGGCTGGC GCAACGATTA CCAGTGATGG TGGGATTGCG TTGATCCTAG ATGTTCCAGG CCTACTAAAG CATTATGCTA AGAAAAAAGC CGATGCCATT CGACAAGCGC GTTAA
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Protein sequence | MGFDVDEEIL QDFLVEAGEI LEQLQEQLVE LENNPQDSDL LNAIFRGYHT VKGGAGFLSL TELVDICHGA ENVFDVMRNG QRSLTPELMD IILQATDEVV AMFEDVKSNK PLVAAEQSLL DTLHRLSKPE AQDQVAAPPI IETPVIEAPS EAASQPKTNS DDFDESEFEA LLDELHGEGN PVGGASQSPS IKPPQSTESS SGADMSSDGD DISDDEFEAL LDQLHGEGQF GGSQDAPSES TDAPVASTNS ESEDISDDEF EALLDQLHGK GQGPVTKKEA NGETSKAPNT PVTSAVSDNT PSQSASEKAT DKSNDTKSSA PSIASSQANI PAKSPGAAEK SAVSKREEKR PAAPQPETTV RVDTKRLDQI MNMVGELVLV RNRLLSLGLS VNDESMSKAI ANLDVVTGDL QGAVMKTRMQ PIKKVFGRFP RVVRDLARTL KKEITLELEG EETDLDKNLV EALADPLVHL VRNSVDHGIE MPADRVAAGK PSLGTVKLSA SQEGDHILLS IVDDGKGMDP DKLKEIAISR GVLDADAAAR MTDEEAFNLI FAPGFSTKTE ISEVSGRGVG MDVVKTKINQ LNGTVNIDSV LGKGTTLEIK VPLTLAILPT LMIVVGDQTF ALPLGSVNEI INMDMSKTNT VDGQLTKIVR SKAIPLFYLR EWLVRKNAKP IPLDRAKGHV VVVQIGTQQL GFVVDALIGQ EEVVIKPLDE LLQGTPGMAG ATITSDGGIA LILDVPGLLK HYAKKKADAI RQAR
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