| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3021 |
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| Symbol | |
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| ID | 4174793 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3652013 |
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| End bp | 3652939 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056047 |
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| Product | homoserine O-succinyltransferase |
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| Protein accession | YP_662581 |
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| Protein GI | 109899326 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1897] Homoserine trans-succinylase |
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| TIGRFAM ID | [TIGR01001] homoserine O-succinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTATTC GAATTCCGAC AGAATTACCT GCACAAAGCA TTCTAAATAG TGAGAATATT
TTTGTGATGG ATACCGATCG TGCTGCCATG CAGGACATTC GTCCGTTGGA AGTTGGTATC
TTGAATTTAA TGCCCAACAA GATGGAAACA GAAGTGCAGT TCTTGCGTCT TTTATCCAAT
ACGCCGTTAC AAATCAATGT GGACTTGATA CGCATCGACA ATCAAGCGCC AAAGAACACC
CCTGAATCTC ATATGAAGGC GTTCTATCAA AACTTTGACG ATGTGGCGGA TAAGCAATAC
GACGGATTGA TTGTCACTGG TGCGCCTTTG GCATTGTTGG ATTATGACGA CGTAAAATAT
TGGCAAAAAA TGAAAGTGGT GTTGGAATGG GCTCAGCGCC ATGTGCAATC CACTTTGTTT
TCATGCTGGG CTGCACACGC TGCCTTATAT CACTTCCACG GTAAAAACCG TAGGTTGCGT
GACGAAAAGC TCAGTGGGAT ATTTGCTCAT CAAGTGAAGG ATGAACATAA CGAACTAATG
CGCGGCTTTG ACCCCGTATT TCATGCCCCT CATTCGCGTT ATGGTGAAAT AAGCGTAGCA
GACTACGAGT CGGTTGAAGG ACTTAGTGTG TTAGCTAGTT CAGAAAAGAC GGGGGCTTAT
ATAGTTGCCT CAGACGACAA ACGATTGGTC TTCGTCACGG GACACCCTGA ATATGATCCT
GATTCGTTGG ATCAAGAATA CAAGCGTGAC CTAAAAGCGG GATTAACCCC CAACATGCCA
GAAAATTACT ATCCTGACGA TGACCCGGCA CAAGGGCCTT TAGTTACTTG GCGTGCTCAC
GGTAGTTTGC TGTTTACCAA TTGGTTAAAC TATTACGTGT ATCAGAATAC GCCTTATGAT
TTAGCATCAT TGTCGAACAA AGCTTAG
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| Protein sequence | MPIRIPTELP AQSILNSENI FVMDTDRAAM QDIRPLEVGI LNLMPNKMET EVQFLRLLSN
TPLQINVDLI RIDNQAPKNT PESHMKAFYQ NFDDVADKQY DGLIVTGAPL ALLDYDDVKY
WQKMKVVLEW AQRHVQSTLF SCWAAHAALY HFHGKNRRLR DEKLSGIFAH QVKDEHNELM
RGFDPVFHAP HSRYGEISVA DYESVEGLSV LASSEKTGAY IVASDDKRLV FVTGHPEYDP
DSLDQEYKRD LKAGLTPNMP ENYYPDDDPA QGPLVTWRAH GSLLFTNWLN YYVYQNTPYD
LASLSNKA
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