| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3014 |
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| Symbol | |
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| ID | 4174787 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3642770 |
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| End bp | 3642985 |
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| Gene Length | 216 bp |
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| Protein Length | 71 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 638056042 |
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| Product | carbon storage regulator, CsrA |
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| Protein accession | YP_662576 |
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| Protein GI | 109899321 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1551] Carbon storage regulator (could also regulate swarming and quorum sensing) |
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| TIGRFAM ID | [TIGR00202] carbon storage regulator (csrA) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00086435 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTAATTT TGACCCGTCG TGTTGGTGAA ACCTTAATGG TCGGTGACGA AGTCACAGTA
ACGGTATTAG GGGTAAAAGG TAATCAGGTA AGAATTGGTG TTAACGCGCC TAAAGAAGTA
TCTGTGCACA GAGAGGAGAT TTACATGCGA ATTCAAGCTG AAAAAAATGG TCAGCTTGCA
GGACATGACT CATCATCATC GGATGAAGAT AATTAA
|
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| Protein sequence | MLILTRRVGE TLMVGDEVTV TVLGVKGNQV RIGVNAPKEV SVHREEIYMR IQAEKNGQLA
GHDSSSSDED N
|
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