| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_3012 |
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| Symbol | |
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| ID | 4174782 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3639622 |
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| End bp | 3641412 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638056037 |
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| Product | oxaloacetate decarboxylase |
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| Protein accession | YP_662574 |
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| Protein GI | 109899319 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.930079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAC CTCTAGCCAT CACGGATGTA GTGCTGCGTG ACGCACACCA ATCATTACTT
GCTACGCGAA TGCGAATTGA AGATATGCTG CCCATTGCGG CAAAGCTTGA TCAGGTCGGA
TACTGGTCTT TAGAAACATG GGGCGGCGCA ACATTTGATT CCTGCATTCG TTACTTGGGC
GAGGATCCAT GGGAGCGTAT TCGTTTGCTT AAAAAGGCCA TGCCAAACAC CAAGCAACAA
ATGCTTTTAC GCGGACAAAA CTTGTTAGGT TATCGACATT ATGCTGATGA TGTGGTCGAA
AAGTTCGTTG AGCGAGCTCA CACCAGTGGT GTAGATGTTT TTCGTATTTT TGACGCAATG
AATGACATTC GTAACCTCAA AACGGCTCTT AGTGCAGCAA TCAAAGTAGG GGCACATGCC
CAAGGCACCA TTTCATACAC TGTAAGTCCC GTGCACTCAT TGCCGCTGTG GCTTGATATG
GCAAAGCAGT TAGAGGATTT GGGTGTACAT TCTATCTGTA TAAAAGATAT GGCCGGTTTG
CTTAAGCCGT ATGTATGTGA AGAGCTTATT ACGCGCCTCA AAGAGACCGT GAGCGTGCCT
ATCGCCATGC AGTGTCATGC TACTACCGGT TTAAGCACAG CAACCTATCA GAAGGCGATT
GACGCAGGGA TCGACATGCT GGATACGTCA ATCTCGTCTA TGAGTATGAC CTATGGCCAT
AGTGCGACAG AAACCATGGT GGCGATTGTT GAAGATACAC CAAGAGACAC AGGCCTTGAT
TTGCCCTTAC TGGCTGAAAT AGCAGCTTAC TTTCGAGACG TTCGTAAAAA GTACGCTAAA
TTCGAAGGCA GTTTGAAAGG GGTAGATGCA CGTATCCTAT TAGCTCAAGT GCCCGGCGGC
ATGTTGACTA ACATGGAATC GCAGCTAGTT GAGCAAGGCG CTCAGGACAA ATTAGATGAA
GTCCTTAAGG AAATTCCTCG GGTGCGTGAA GACCTCGGTT TTATTCCGCT TGTCACTCCC
ACCTCTCAAA TCGTCGGTAC TCAGTCTGTA CTTAACGTGC TAACCGGCGA GCGTTATAAA
AGTATTACCA AAGAAACGGC TGGTGTATTA AAAGGCGAGT ATGGCGCCAC CGCCGCACCA
GTGAATGCTG AGCTACAAGC ACGTGTATTG GATGGCAAAG AAGCAATAAA CTGCCGACCA
GCTGATTTAT TGGATGATGA ATTAGACACC TTAGAGCAAG ATTTACTCAA TCAAGCGAAA
GAGCAAGGGA TTACGCTCGC TGAGAATGCG ATAGACGATG TACTCACTTA TGCGCTATTC
CCACAGATTG GCTTGAAATT TTTGAAGAAT CGCCATAATC CCGATGCATT TGAGCCCGTG
CCCACCGCTG ACAATATTGA CGCTAGCGCA GCGGTGAGTG CGACACCAAG TAAAGCCACA
GAATCCTACT CTGTAAGAGT TGATGGAAAA GTCTACGCTG TTGAAGTGGC CCAAGGCGGG
GAGCTGACAG ATATTCAGGT AGCAGGCACA GCCCCTCAAA ATAGTGCACC AGCTACATCT
GCCCCGGTAT CCGCTGCAGG TGAAGATGTT GTAGCACCGC TAGCGGGTAA TGTTTTCAAG
TTGCTCGTGC GCTCAGGTGA TTCAATCAGC GAAGGCGATG TAATTGTCAT CATGGAAGCG
ATGAAAATGG AAACCGAAAT TCGCTCCACC GCTTCAGGTA CCATCCAAGA TATATTGGTT
AAAGAAGGTG ATGCAGTGCA GTCTGGCCAA ACGATGCTGA CGTTGGCGTA G
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| Protein sequence | MSKPLAITDV VLRDAHQSLL ATRMRIEDML PIAAKLDQVG YWSLETWGGA TFDSCIRYLG
EDPWERIRLL KKAMPNTKQQ MLLRGQNLLG YRHYADDVVE KFVERAHTSG VDVFRIFDAM
NDIRNLKTAL SAAIKVGAHA QGTISYTVSP VHSLPLWLDM AKQLEDLGVH SICIKDMAGL
LKPYVCEELI TRLKETVSVP IAMQCHATTG LSTATYQKAI DAGIDMLDTS ISSMSMTYGH
SATETMVAIV EDTPRDTGLD LPLLAEIAAY FRDVRKKYAK FEGSLKGVDA RILLAQVPGG
MLTNMESQLV EQGAQDKLDE VLKEIPRVRE DLGFIPLVTP TSQIVGTQSV LNVLTGERYK
SITKETAGVL KGEYGATAAP VNAELQARVL DGKEAINCRP ADLLDDELDT LEQDLLNQAK
EQGITLAENA IDDVLTYALF PQIGLKFLKN RHNPDAFEPV PTADNIDASA AVSATPSKAT
ESYSVRVDGK VYAVEVAQGG ELTDIQVAGT APQNSAPATS APVSAAGEDV VAPLAGNVFK
LLVRSGDSIS EGDVIVIMEA MKMETEIRST ASGTIQDILV KEGDAVQSGQ TMLTLA
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