| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2995 |
|---|
| Symbol | |
|---|
| ID | 4174765 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3621586 |
|---|
| End bp | 3622701 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 638056020 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase, dimerisation region |
|---|
| Protein accession | YP_662557 |
|---|
| Protein GI | 109899302 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0400404 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCTT TGATTTGCGC TAGTATAGCG ACAAGTTTCG TTAACCTTAC TCAGAGTATT
ATTAGAATGT CTGTTTTTGA CCATATCGAA TTTGATGAAC ACGAGCACGT CGCTTTCTGC
CACGATAAAA AGACCGGATT AAAAGCTATT ATTGCCGTGC ACAATAGTCA TTTAGGTCCC
GCTCTTGGTG GCTGTAGGAT GTGGCCATAT GCTAATTCGG ATGAGGCACT GAACGATGTG
CTTAGATTGT CAAAAGGCAT GACCTACAAA GCGGCGATGG CCAATCTAAA CCAGGGTGGC
GGTAAAGCCG TTATTCTTGG GGACCCTCGC ATGCATAAAA CAGCTGATAT GATGCGTGCT
ATGGGCCGCT TTGTGGAAAG CTTAAGTGGT AAATACATCA GTGCAGAAGA TTCGGGCATG
TCAGTCGCTG ATCTACAAAT CATGGCTGAG GAAACCACAC ATGTTTCAGG TACCAAAGCC
ACCTACCATT TTGCAGGAGA GGAAGCAGAC GGAAACCCCG CGCCCTCAAC CGCTTATGGC
GTATTCACAG GTGTTAAAGC GTCTGTTAAA TATCACTTTG GCTCTGATTT ACAGGGTAAG
AAAGTCGCTA TTCAGGGACT AGGGCATGTT GGGTACAGGC TTGCGGAACA CTTGCACCGG
GAGGGGGCTG AACTATTTGT TGCTGATATT TACCCTGAAG GGGTAAATCG AGCGAAAGAA
AAATTAAATG CGACTATAGT ATCACCCGAT GAAATTCTTA CATTAGATGT GGATGTGGTC
GCCCCTTGTG CAATGGGCGC TACTATTAAC CGTCAGTCGA TTAATACGCT AAAAGCAAAG
GTCATTGCAG GAGCCGCAAA TAATCAATTG GCGTCGGAAG ATTTAGGTGA ATTGCTTAAA
GATAAGGGGA TCTTGTATGC CCCTGACTAC GTTATTAATG CTGGAGGGAT CATCGATATT
TACCATCAAA AGATGTTGAG TTCTAATGAA GCATTAAAAA CGCACTTGGA AAAAATTGGC
GCAACACTAA TGGAAGTATA TACACGTGCC GATGAACAAA ACTTAGCCAC TAATAGGGTC
GCTAACACTA TTGCAGAAGA AAAATTCAAA AAATAG
|
|---|
| Protein sequence | MSSLICASIA TSFVNLTQSI IRMSVFDHIE FDEHEHVAFC HDKKTGLKAI IAVHNSHLGP
ALGGCRMWPY ANSDEALNDV LRLSKGMTYK AAMANLNQGG GKAVILGDPR MHKTADMMRA
MGRFVESLSG KYISAEDSGM SVADLQIMAE ETTHVSGTKA TYHFAGEEAD GNPAPSTAYG
VFTGVKASVK YHFGSDLQGK KVAIQGLGHV GYRLAEHLHR EGAELFVADI YPEGVNRAKE
KLNATIVSPD EILTLDVDVV APCAMGATIN RQSINTLKAK VIAGAANNQL ASEDLGELLK
DKGILYAPDY VINAGGIIDI YHQKMLSSNE ALKTHLEKIG ATLMEVYTRA DEQNLATNRV
ANTIAEEKFK K
|
|---|
| |