| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2993 |
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| Symbol | |
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| ID | 4174763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3617682 |
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| End bp | 3620582 |
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| Gene Length | 2901 bp |
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| Protein Length | 966 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638056018 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_662555 |
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| Protein GI | 109899300 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000340556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTACAA ACTCAAAGTT GACGAAGTCG ATTCGTCTTG CTATGGCTGT TGGTACAGTT
GCAGCTATTT CATCTAGTAA TGTTTACGCA CAAGAGGCTG CAAGCGCTGC GGAAGACGCA
GCCGTTGAAA AAATTCAAGT TACAGGTTCA CGCATTCAAC GCGCTAACAT GGTTAGCGCT
AGCCCAGTTA CTGAAATTTC AGCTGCTGAT ATCAAAGTAA GTGGTATTAC TCGCGTAGAA
GATATATTAA ATGATATGCC AGCAGTGTTT GCTGGACAAA CTTCAGGTAC AGCTAACGGG
GCTACCGGTA CTGCTACTAT TGACTTACGT AACCTTGGTC CTGAGCGTAC ACTAGTTCTA
CAAAACGGTC GCCGTTTACC ATCTGGTTCA CCTTCTGCTG GTGGTATCAG CGCGGATGTT
AACCAAATTC CAGCTGCATT AATTGAGCGA ATCGAAGTAC TAACAGGTGG TTCCTCTGCT
ACTTATGGCT CAGACGCGGT TGCAGGCGTA GTTAACTTTA TTCTTAAAGA TGACTTCGAA
GGTTTCTCCT TTGATTATCA ACACAGTTTT TACCAACACG ATAATGATAA CTCTGGTATT
CAAGACCTAG TATCAGGCTC TGGTTTCCCA GTTGCCAGCG GCAGCGTTGA TGATGGTAAT
GCGAACGACT TCTCATTCTT GTTTGGTGCA AACACTGATG ACGGTCGAGG AAACGTTACC
ATGTATGGTA CTTTCCGTGA CATTCAAGCC GTGGTTCAGT CATCACGTGA TTACAGTTCT
TGTGCAATAA ACGGCTCACC AGATGCAATG GGATGTGGTG GTTCAAGTAC TACTCCTTTA
GGTCGTTTTA CCGATTTTGA CACATTTAAC TATCAATTAA GCGGCGAAGA GTTTGTGCCG
TTTACTGACC TGTATAACTA TGGTCCTTTA AACTACTTCC AACGCCCAGA TGAGCGTAAA
ACGTTTGGTG CGACCAGTCA TTATGAGATT AATGAGCATG TAGAAGTGTA CGCAGAGTTA
AGTTACATGG ATGATCGCAG CGTTGCGCAA ATCGCTCCAT CTGGTAACTT CTTTAGCACT
GACCGTTTAT ACTGTGGTAA CCCTTATCTT TCAGATTCTC AATTCGATCT AACATGTGGC
GCTGCAGGTT TAACTGATGA AGATTATTAT GAAGGCTTTT ATATTGGCCG TCGTAATGTT
GAAGGCGGCC CTCGTCAAGA TGATCTTCGC CATACTTCAT TACGTGGGGT ACTAGGTGTT
CGCGGTATTA TCGATGACAA CTGGTCCTAT GACGTATTTG CTAATTACGG AACAGTTTCT
TACCTCGAAA CGTACCGTAA TGAACTATCT GTTGATCATA TGAAAAAAGC GTTAGACGCT
CGAATTGATC CTGATTCAGG CGACATTGTG TGTGCATCAG TCCTAGATGG AAGCGATCCT
AGCTGTGTAA CGTGGAATAT TTTCAGCGAA GGTGGAGTCA CAGACGAAGC ATTAGCTTAT
TTAATTAAGC CGCTTTACTC TCGCGGTGAT ACTAAATCAA CGCAAGTGAG TGGTTATGTA
ACGGGTGATT TGACTGACTC AGGTATTGTT GTTCCGGGTA CATCAACGGG TGTTGGTGTT
GTCGCTGGTG TTGAATATCG TAAAGAACAA CTAATTCTTG AGCCTGATTT TGGTTTCACA
TCTGGTGACG GTGCAGGTCA AGGTGGACCA ACTGCGGGTG TACGTGGTGA CTTCAGTGTT
AAAGAAATCT TCGGCGAGTT GAACGTTCCT TTACTAGAAG GAAAAGAGTT TGCTGAAGAG
CTGACGTTAG AGCTTGCTTA TCGTTATTCT GATTACTCAA CAGACAAAAC AACGAATACT
TACAAGTATG CATTGAACTG GGGTATTAAC GAGCAAGCAC GCGTTCGGGC CAGCTTCCAA
CGCGCTGTTA GAGCCGGCAA CATACGTGAG TTGTTCCGTC CTTCTTCCCT AGGTTTGTTC
AACATGGATA TCGATCCATG TGGAGTAGGC GGAGACTTTA CATTGGCCCA GTGTCTAAAT
ACTGGCCTCA CAGAGGCGCA GTATCAGACT AGTGCTTTAG AAAGCCCTGC TGGCCAGTAC
AATAGTATCA CTGGTGGTAA TACTGAAGTG AACCCAGAAG AATCAGATAC GTTCTCTTTC
GGTGTTGCTT TATCGCCTGA TTTCTTACCA GGTTTCACAC TTAATATCGA TTACTTCAAA
ATTGAAGTTG AAGACGCAAT TGATTCAATT CCTGAGACCA CAATACTCCA ACTATGTGGT
GATACGGGCA ATGCTGCTTA CTGTGATTTG ATTAATCGTG GACCTAACGG AAACTTATGG
GTTGGTACTT CATCAATTAC AGCAACTGAT CTTAACATTG GTTATCTTAA GACTGAAGGC
GTTGACTTTG ACGCTAACTA CGAGATGGAC TTAGGTGAAG GTGGCGAGCT TAGACTTGGC
TTTATCGCAA CCTTACTTGA TTCGTTGGCT ACACAATCGA TTCCTGGTGG CGACGTCGAC
GAGTGTGCTG GTTACTGGGA CCGTACGGTA TGTGGACAGC CGACCCCAGA ATGGCGTCAT
AATTTGAAAG CGACTTGGGT TTCACCTTGG GACGTGAATG TGACGGCTAC TTGGAGACAT
ATGTCTGAAG TCAATGAGTA CGAAGGTGTT GGACAAGAAG ATGGTCCAGG TAAAATTGAT
GCTCAAAACT ATCTTGATTT GAGTGCTAAC TGGCAAGCGC ATGAGAATGT TAATTTACGT
GTTGGTGTAA ATAACATTTT AGACCGCGAT CCACCTATCA TTGTTAACGC CCCTTCTGGT
ACGGGCAATG GTAATACTTT CCCTGGATTC TACGATGCTT TAGGTCGTTA TGTATTCGGT
GGCGTTACAG TAACGTTCTA A
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| Protein sequence | MFTNSKLTKS IRLAMAVGTV AAISSSNVYA QEAASAAEDA AVEKIQVTGS RIQRANMVSA
SPVTEISAAD IKVSGITRVE DILNDMPAVF AGQTSGTANG ATGTATIDLR NLGPERTLVL
QNGRRLPSGS PSAGGISADV NQIPAALIER IEVLTGGSSA TYGSDAVAGV VNFILKDDFE
GFSFDYQHSF YQHDNDNSGI QDLVSGSGFP VASGSVDDGN ANDFSFLFGA NTDDGRGNVT
MYGTFRDIQA VVQSSRDYSS CAINGSPDAM GCGGSSTTPL GRFTDFDTFN YQLSGEEFVP
FTDLYNYGPL NYFQRPDERK TFGATSHYEI NEHVEVYAEL SYMDDRSVAQ IAPSGNFFST
DRLYCGNPYL SDSQFDLTCG AAGLTDEDYY EGFYIGRRNV EGGPRQDDLR HTSLRGVLGV
RGIIDDNWSY DVFANYGTVS YLETYRNELS VDHMKKALDA RIDPDSGDIV CASVLDGSDP
SCVTWNIFSE GGVTDEALAY LIKPLYSRGD TKSTQVSGYV TGDLTDSGIV VPGTSTGVGV
VAGVEYRKEQ LILEPDFGFT SGDGAGQGGP TAGVRGDFSV KEIFGELNVP LLEGKEFAEE
LTLELAYRYS DYSTDKTTNT YKYALNWGIN EQARVRASFQ RAVRAGNIRE LFRPSSLGLF
NMDIDPCGVG GDFTLAQCLN TGLTEAQYQT SALESPAGQY NSITGGNTEV NPEESDTFSF
GVALSPDFLP GFTLNIDYFK IEVEDAIDSI PETTILQLCG DTGNAAYCDL INRGPNGNLW
VGTSSITATD LNIGYLKTEG VDFDANYEMD LGEGGELRLG FIATLLDSLA TQSIPGGDVD
ECAGYWDRTV CGQPTPEWRH NLKATWVSPW DVNVTATWRH MSEVNEYEGV GQEDGPGKID
AQNYLDLSAN WQAHENVNLR VGVNNILDRD PPIIVNAPSG TGNGNTFPGF YDALGRYVFG
GVTVTF
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