| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2970 |
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| Symbol | |
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| ID | 4174740 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3597199 |
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| End bp | 3597897 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055995 |
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| Product | electron transport complex RsxE subunit |
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| Protein accession | YP_662532 |
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| Protein GI | 109899277 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4660] Predicted NADH:ubiquinone oxidoreductase, subunit RnfE |
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| TIGRFAM ID | [TIGR01948] electron transport complex, RnfABCDGE type, E subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATGAAT TCAAACAGTT AAGTTGGCAA GGCCTGTGGA AGAATAACCC GGCCCTAGTA
CAACTACTTG GTTTGTGCCC GCTACTTGCC GTTACTGCGA CCGTTACCAA CGGTCTAGGC
CTAGGCTTAG CCACGACCTT GGTCTTGATT GGCTCAAATG CGACCGTATC GATTATTCGT
AACCTAGTGC CAAATGAAAT CCGAATTCCT ATTTTCGTCA TGATTATTGC CGCGTTTGTC
ACTGTCGTGC AGCTTTTAAT GAATGCCTAC ACGTACGAGT TGTATCAGGC GCTTGGTATA
TTCATTCCCC TTATTGTGAC CAACTGTGCA ATTATCGGCC GAGCTGAAGC TTACGCTTCT
AAAAACCCTA TTGGCTATGC CGCATTCGAC GGGTTGATGA TGGGGCTCGG GTTTACCGTG
GTGCTCGTGC TTTTGGGGGC AATGCGTGAA CTGCTTGGCT ACGGTACTTT ATTTGCCGGA
GCTAACCTGC TGTTAGGCGA TTGGGCAACC AGTTTAAAAG TGACAATTTT CACTACAGAT
TCCCCCTTCT TACTTGCCAT TTTACCTCCA GGGGCATTCT TAGGTATGGG CTTGCTGATC
GCCGCTAAGA ACATACTTGA TAAGCGTTTT GAACGTATGT TTGCAGCCAA ACAAGAAGCC
AAAGTCGTTC AGCGTGCTCG TGTCACTGCC GAAACCTAA
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| Protein sequence | MNEFKQLSWQ GLWKNNPALV QLLGLCPLLA VTATVTNGLG LGLATTLVLI GSNATVSIIR
NLVPNEIRIP IFVMIIAAFV TVVQLLMNAY TYELYQALGI FIPLIVTNCA IIGRAEAYAS
KNPIGYAAFD GLMMGLGFTV VLVLLGAMRE LLGYGTLFAG ANLLLGDWAT SLKVTIFTTD
SPFLLAILPP GAFLGMGLLI AAKNILDKRF ERMFAAKQEA KVVQRARVTA ET
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