| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2965 |
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| Symbol | |
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| ID | 4174735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3591647 |
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| End bp | 3592228 |
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| Gene Length | 582 bp |
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| Protein Length | 193 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055990 |
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| Product | electron transport complex, RnfABCDGE type, A subunit |
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| Protein accession | YP_662527 |
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| Protein GI | 109899272 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4657] Predicted NADH:ubiquinone oxidoreductase, subunit RnfA |
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| TIGRFAM ID | [TIGR01943] electron transport complex, RnfABCDGE type, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000124852 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACTGAAT TTTTACTTTT ACTGATCGGA ACCGTACTGG TTAATAACTT TGTATTGGTT
CAATTCCTTG GTTTATGCCC TTTTATGGGA GTCTCAGGGA AGCTCGAAAC CGCCATTGGT
ATGTCCATGG CGACCACTTT CGTTTTAACC CTAGCGTCAC TTTCTAGTTA TTTGGTTGAA
CACTACATTT TGTTGCCTTT AGGCATCGAG TATCTGCGCA CACTGAGCTT TATTCTTGTT
ATTGCTGTGG TGGTACAATT TACTGAAATG GTCGTGCACA AAACCAGCCC TACGTTATAT
CGCTTGTTAG GTATCTTCTT GCCGTTGATC ACTACGAACT GCGCGGTATT GGGTGTAGCG
CTACTGAACA TTAACCATGA TCACAACTTT ATTGAATCGG TTATTTACGG GTTTGGTGCA
GCCGTTGGTT TTTCATTAGT TCTCATTTTG TTCGCTGCGA TGCGCGAGCG CTTAGCAGTG
GCAGATGTAC CTGCGCCGTT TAAAGGCGCC TCTATCAGTA TGATAACCGC AGGCTTAATG
TCGTTAGCCT TTTTAGGTTT TACTGGTTTG GTGAAATTTT AA
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| Protein sequence | MTEFLLLLIG TVLVNNFVLV QFLGLCPFMG VSGKLETAIG MSMATTFVLT LASLSSYLVE
HYILLPLGIE YLRTLSFILV IAVVVQFTEM VVHKTSPTLY RLLGIFLPLI TTNCAVLGVA
LLNINHDHNF IESVIYGFGA AVGFSLVLIL FAAMRERLAV ADVPAPFKGA SISMITAGLM
SLAFLGFTGL VKF
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