Gene Patl_2961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2961 
Symbol 
ID4174729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp3584552 
End bp3585208 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content44% 
IMG OID638055984 
ProductexsB protein 
Protein accessionYP_662523 
Protein GI109899268 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTACAAA AGGTGGTGGT AATTTTTTCA GGAGGCATGG ATTCATTTAC CGTGCTAAAT 
ATGGCTGTCA AAGAGGGCTA TGAAGTGCAT GCCCTGTCTT TCAACTACGG ACAGCGCCAT 
AGCAAAGAAT TAGATTACGC CAGCCGAGCT TGTATAACCC TAGGCGTGGC GCATAAAATT 
ATTGATATAT CCGCAATCAA TGAGCTCATT GGTGGCTCGT CACTTACCTC TGATGTGGAT 
ATTCCAGAAG GGCATTATGC CGAAGAAAGC ATGAAGTCGA CCGTGGTCCC TAATCGCAAT 
ATGATTTTAT TATCCATGGC TGTAGGTTAC GCCGTTTCGC TGGATGCAAA TAAAGTGTAC 
TACGGAGCGC ATTCAGGCGA TCACGACATT TACCCTGATT GCCGCCCTGA ATTTGTTGAA 
CGCATGAATG ACGTCTGTGC AATTGCCAAC TATGAAAAAG TGGAAATCGT GTCTCCCTTT 
TTGTATCAAA GTAAAATAGA TATTTTAACC GCAGGGTTAA ACATGGGACT GGATTATAAC 
CTGACATGGA CGTGTTATAA CGGCCGAGAA AAAGCCTGTG GAAAATGCGG TGCCTGCCAA 
GAGCGCTTAG AGGCCTTTGA CAAAAATAAC GCGCAAGACC CATTAGAATA CGAATAA
 
Protein sequence
MVQKVVVIFS GGMDSFTVLN MAVKEGYEVH ALSFNYGQRH SKELDYASRA CITLGVAHKI 
IDISAINELI GGSSLTSDVD IPEGHYAEES MKSTVVPNRN MILLSMAVGY AVSLDANKVY 
YGAHSGDHDI YPDCRPEFVE RMNDVCAIAN YEKVEIVSPF LYQSKIDILT AGLNMGLDYN 
LTWTCYNGRE KACGKCGACQ ERLEAFDKNN AQDPLEYE