| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2950 |
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| Symbol | |
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| ID | 4174718 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3572273 |
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| End bp | 3573466 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055973 |
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| Product | ABC-type Na+ efflux pump, permease component |
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| Protein accession | YP_662512 |
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| Protein GI | 109899257 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1668] ABC-type Na+ efflux pump, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.404593 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGTTAG TCTTTTTTAA AGAAATAAAA GAATTGCTGC GCGACCGTAA AACGTTGTTT
TTTATGATTG CGTTACCGAT CCTCATTTTC CCGTTAATTT TTGGCGGAAT GGCGTATTTC
ACCGCTCAGG CATTCGAAAA AGCGGAAAGC AAAGTCTTGA AATACGCGGT GGTGAACGAC
CAGTATGCGC CAGAGCTAAC AAATGACTTG GCAGCCTCAG ATAAGTTTGA GCGTGTAGAT
ATTGCCATTA ACGCCGATTA CACGGCGTTA ATTAACAGTG ACACCGTTGA TTTTGTAATG
GTACTGCCGG AAAACTACAG TGCAGATATC CTTCGAAGCG GTCAGCTAAA CATAACACTT
TATTTAAATG ACGCGGGATT AAACATGGTG CGCAACCGTG TGAATTCAAT GGTGCAAAAG
TATGCCGATG CGTATCAAGC ATCAGCGTTT TCTGAACTTG GTGTCACCCT AGTGCAGCAA
GATGCTTTGT TAAAACCCAT CGTTCTTGAG CAAATAAGCA CAGCGGGTCA ACGGGAAAGT
TGGGGCGAGA AAATAGGTGG TATGCTGCCA TATTTACTGT TTGTATTGTG TTTTCAAGGG
GCGATGTTTC CTGCGACCGA CATTGGTGCC GGTGAAAAAG AGCGGGGCAC ATTAGAAACG
CTGCTTATTT CACCTATCGA TCGTACGAAA ATTGTTTTAG GTAAATTTTT AACAATTGCT
TGTGCTGGCG CCACCACCGC ATTGATTACC GTTGTTAGCA TGGCAGTATG GGGGTTAGTG
CTCAGCCGCG GCTTTGCTAT GCAGTTTGTA GCTGACTTTA TGAGCCAAAT TGGCATTGTT
GATTTTGTTT TGATGTTTTT GATGCTGATC CCGCTGGTGG CTATCTTTGC GGCAGTATTG
CTGAGTATTT CAATTTACGC TCGTAGCTTT AAAGAGGCCC AGAGTTATAT GGGGCCGTTA
GTGATTTTCG TTATCATGCC GGTCATGGTG GCACTCATGC CGGGAGTTAA ACTTAAAGGC
GGTTGGGCTT GGGTGCCTTT GACAAATGTA GCGCTAGCCA TGAAAGAACT GGTAAAAGGT
ACCATGGACT ATTTTCAGTT AATTGGCATT TTTGCTTCAA CGGCATTGAT TGCTGCATTA
CTGCTGGGAT TTTGTGTGTA CTGGTTTAAA CAAGAAAAAG TGTTGTTTAG ATAA
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| Protein sequence | MWLVFFKEIK ELLRDRKTLF FMIALPILIF PLIFGGMAYF TAQAFEKAES KVLKYAVVND
QYAPELTNDL AASDKFERVD IAINADYTAL INSDTVDFVM VLPENYSADI LRSGQLNITL
YLNDAGLNMV RNRVNSMVQK YADAYQASAF SELGVTLVQQ DALLKPIVLE QISTAGQRES
WGEKIGGMLP YLLFVLCFQG AMFPATDIGA GEKERGTLET LLISPIDRTK IVLGKFLTIA
CAGATTALIT VVSMAVWGLV LSRGFAMQFV ADFMSQIGIV DFVLMFLMLI PLVAIFAAVL
LSISIYARSF KEAQSYMGPL VIFVIMPVMV ALMPGVKLKG GWAWVPLTNV ALAMKELVKG
TMDYFQLIGI FASTALIAAL LLGFCVYWFK QEKVLFR
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