| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2944 |
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| Symbol | ruvB |
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| ID | 4174712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3566331 |
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| End bp | 3567338 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055967 |
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| Product | Holliday junction DNA helicase RuvB |
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| Protein accession | YP_662506 |
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| Protein GI | 109899251 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2255] Holliday junction resolvasome, helicase subunit |
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| TIGRFAM ID | [TIGR00635] Holliday junction DNA helicase, RuvB subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000368947 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATAGAAG CCGATCGTCT CATTCAACCT ACCGCCCTAC GCGAAGATGA AGTCATCGAT
CGTGCTATCC GCCCTAAAAT GCTGGCGGAT TATACAGGGC AAGACCATGT GTGTGAGCAA
ATGGATATCT TTATTCAGGC CGCGCGTAAA CGCAGTGATG CGTTGGATCA TTTATTGATT
TTTGGCCCCC CAGGCTTAGG CAAAACGACC TTGGCGAATA TCGTGGCAAA CGAAATGGGC
GTGAGTATCA AAACGACCTC AGGGCCGGTA CTTGAAAAAG CGGGGGACTT AGCGGCGCTG
CTAACCAATT TAGAAGAAAA CGATGTGTTG TTTATTGATG AAATTCATCG TTTGAGCCCA
GTGGTGGAAG AAATTCTGTA CCCTGCGATG GAAGATTATC AGCTGGATAT CATGATAGGA
GAGGGGCCAG CTGCCCGCTC AATTAAACTT GAGTTACCGC CGTTTACCTT GATTGGTGCA
ACAACACGAG CAGGCTCATT GACGTCACCA TTGCGCGACA GATTCGGTAT TGTGCAGCGC
CTTGAGTTTT ACAATATTAA AGATTTAACC CAAATCGTAA AGCGTTCTGC CCATTTCCTG
GAATTAAATT TAGACGAGGA AGGCGCGATG GAAATCGCCA AGCGCTCCCG CGGTACACCG
CGAATCAGTA ACCGCTTGCT GCGCAGGGTA CGAGATTATG CCGAAATAAA AGCAAACGGT
GAAATTAGCA GTGACGTTGC TTCAGCTGCG CTGGATATGC TGGATGTAGA TAAAGAAGGC
TTTGACTACA TGGACCGAAA ATTGCTGACC ACCATCATAG ATAAATTTAT GGGTGGGCCT
GTGGGTCTCG ATAACTTAGC GGCGGCGATT GGTGAAGAAC GAGACACGAT AGAAGATGTG
ATAGAGCCCT TTTTAATTCA ACAAGGGTTC TTGCAGCGTA CCCCAAGAGG GCGAATTGTG
TCTCAGCGGG CATATTTGCA TTTTGGTTAT GATTACGAGC CTAATTGA
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| Protein sequence | MIEADRLIQP TALREDEVID RAIRPKMLAD YTGQDHVCEQ MDIFIQAARK RSDALDHLLI
FGPPGLGKTT LANIVANEMG VSIKTTSGPV LEKAGDLAAL LTNLEENDVL FIDEIHRLSP
VVEEILYPAM EDYQLDIMIG EGPAARSIKL ELPPFTLIGA TTRAGSLTSP LRDRFGIVQR
LEFYNIKDLT QIVKRSAHFL ELNLDEEGAM EIAKRSRGTP RISNRLLRRV RDYAEIKANG
EISSDVASAA LDMLDVDKEG FDYMDRKLLT TIIDKFMGGP VGLDNLAAAI GEERDTIEDV
IEPFLIQQGF LQRTPRGRIV SQRAYLHFGY DYEPN
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