Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2942 |
Symbol | |
ID | 4174710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3564605 |
End bp | 3565315 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055965 |
Product | MotA/TolQ/ExbB proton channel |
Protein accession | YP_662504 |
Protein GI | 109899249 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0811] Biopolymer transport proteins |
TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000153109 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCGGCTG AGTTATCAAT ATTTGGATTA TTTTGGCAAG CTAGCTTATT AGTTCAGCTT GTGATGTTGT TGTTATTAGC CGCGTCTGTG GCATCTTGGA CGTTTATTTT TCAGCGTTCG CAGGCGTTGA GCCGTGCAAA AAATGATATG AAAAAATTTG AGGATAAATT TTGGTCAGGG GTCGATTTAA ATCGTCTTTA TCAAGAATTA GCTGCTCGAG AATCAGTGCA AGGTATGGCC AGTTTATTCT GTGCTGGCTT TAAAGAATTT GTCCGCTTGC GTAAGTCGTC ATCTACCCCA TCTGAGGCGA TAATGGACGG TACTTACCGT GCGATGCGTG TTTCCTTGTC AAGAGAAATT GACGAATTAG AGAGCCGTTT ACCTTTCTTG GCGACTGTGG GCTCAATTAG CCCGTATATT GGTTTATTTG GTACTGTGTG GGGGATCATG AATGCGTTTA TCGCTTTGGG TGAAGTCCAA CAAGCCACGC TAGCCATGGT GGCGCCTGGT ATCGCTGAGG CGTTGATCGC AACCGCTATG GGTCTGTTTG CCGCTATCCC TTCTGTTATC GCTTATAACC GTTTCAGCCA TCAAGTAGAA AAGCTCGAAA ACAACTACGG TAACTTTATG GAAGAGTTTT CCAGCATATT GCATCGTCAG TCGCTGGTAA CAAAGGCGGA TACCGTCACC AACGGTCCAG CTCAGGGCTA A
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Protein sequence | MSAELSIFGL FWQASLLVQL VMLLLLAASV ASWTFIFQRS QALSRAKNDM KKFEDKFWSG VDLNRLYQEL AARESVQGMA SLFCAGFKEF VRLRKSSSTP SEAIMDGTYR AMRVSLSREI DELESRLPFL ATVGSISPYI GLFGTVWGIM NAFIALGEVQ QATLAMVAPG IAEALIATAM GLFAAIPSVI AYNRFSHQVE KLENNYGNFM EEFSSILHRQ SLVTKADTVT NGPAQG
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