| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2929 |
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| Symbol | |
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| ID | 4174695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3551656 |
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| End bp | 3552573 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055950 |
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| Product | pyruvate carboxyltransferase |
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| Protein accession | YP_662491 |
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| Protein GI | 109899236 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0756431 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATGAGTG CTTTACCAAG TAAAGTAAAA ATAGTTGAAG TAGGTCCGCG AGATGGCTTG
CAAAATGAGA AAGCGAGTAT TGATTTAGTC ACTAAAGTAA CTTTGATTGA GGCGCTTGCC
AAATCAGGTC TAAGCATGAT TGAGACAGGC AGCTTTGTAT CACCTAAGTG GGTGCCACAA
ATGGCTGACT CAGCCCAAGT CTTCGCGGCA ATAAATCGCC AAGACACCGT AATTTACAGT
GCATTAACGC CTAATCTAAC AGGATTTGAA GCAGCGCTAG AAGCAGGCGC TGATGAAGTC
GCTATTTTTG GTTCTGCTTC TGAATCCTTT TCACAAAAAA ATATAAACTG CTCAATTGCT
GAGAGTCTAG CGCGTTTTGA ACCGGTTATT GCTGCGGCGA AAGCTAAAAA TATAAAAGTA
CGTGGTTATG TGTCGTGCGT TCTGGGATGC CCCTACGAAG GAGAGATAGC GCCTGCCAAT
GTGGCCAGTG TGGCTAAAAC CTTGTTCGAG ATGGGCTGCT ATGAAATTTC GTTAGGCGAC
ACGATAGGCG TAGGCACTCC TATAGCCACA CAAATAATGC TCAATGCCGT ATTAGATGTG
GTCCCCCTCT GCGCTGTTGC GGTGCATTTT CACGATACCT ACGGTCAAGC TTTAGCGAAT
ATTTTGGTGG CGTTACAATT GGGGATCAAC GTAGTTGATA GCGCGGTAGC CGGCCTAGGC
GGATGCCCCT ATGCCAAGGG TGCATCAGGT AATGTAGCCA CTGAAGACGT GGTTTACATG
TTACATGGAA TGGGCATTGC CACAGGTATT GATTTATCAA TGTTAGCCAA GGCAGGACAA
GACGTGTGTA CGAAGTTAGG CATAAACTCT GTATCAAAAG TGGCAAACGT TTACGCCAAT
AAAGCCCTAA CTCAGTAA
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| Protein sequence | MMSALPSKVK IVEVGPRDGL QNEKASIDLV TKVTLIEALA KSGLSMIETG SFVSPKWVPQ
MADSAQVFAA INRQDTVIYS ALTPNLTGFE AALEAGADEV AIFGSASESF SQKNINCSIA
ESLARFEPVI AAAKAKNIKV RGYVSCVLGC PYEGEIAPAN VASVAKTLFE MGCYEISLGD
TIGVGTPIAT QIMLNAVLDV VPLCAVAVHF HDTYGQALAN ILVALQLGIN VVDSAVAGLG
GCPYAKGASG NVATEDVVYM LHGMGIATGI DLSMLAKAGQ DVCTKLGINS VSKVANVYAN
KALTQ
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