| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2919 |
|---|
| Symbol | gltX |
|---|
| ID | 4174682 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudoalteromonas atlantica T6c |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008228 |
|---|
| Strand | - |
|---|
| Start bp | 3536654 |
|---|
| End bp | 3538063 |
|---|
| Gene Length | 1410 bp |
|---|
| Protein Length | 469 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 638055937 |
|---|
| Product | glutamyl-tRNA synthetase |
|---|
| Protein accession | YP_662481 |
|---|
| Protein GI | 109899226 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00464] glutamyl-tRNA synthetase, bacterial family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000159151 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCGG TTACCCGTTT TGCTCCAAGC CCTACCGGTT TTTTACATGT TGGTGGTGCA
CGTACTGCAC TTTATTCTTG GCTTTATGCA AAAAGCCAAG GTGGAAAATT TGTACTTCGA
ATTGAAGATA CGGATATAGA GCGTTCTACT CAGGAAGCCA TCGATGCGAT TTTGGAAGGT
ATGGAGTGGT TAGGATTAAC ATGGGACGAT GGCCCATATT ATCAAACAAA ACGGTTCGAC
CGATATAAAG CGCTCATTAA TGAGATGCTT GAAGAAGGTA AGGCTTATAA ATGTTTTATG
AGCAGTGCTG AGCTTGATGA AATTCGCGAA AAACAAAAAG CGAACGGTGA AAAACCAAGA
TACCCAGGCA CTTGGCGTGA CCGTACTGAT CATCCAGAAG GCGAACCTTT TGTTATTCGC
TTTAAAAACC CGTTAGAGGG TAAAGTGCTG GTAAAAGATC ATATTCGCGG AAACATCGAA
ATTGCAAACA GTGAACTAGA TGACCTCATT ATATTACGAA GTGATGGAAC TCCGACCTAT
AACTTCTGCG TTGTGGTTGA TGATTGGGAT ATGGGGATTA CGCATGTGGT GCGCGGTGAA
GACCACATTA ATAATACCCC ACGCCAAATT AATATTTTAC AAGCACTTGG GGCACCAGTA
CCTGAATATG CCCATGTATC TATGATATTA GGTGATGATG GCAAAAAACT ATCTAAGCGT
CATGGTGCTG TTAGTGTAAT GCAATATCGT GATGACGGCT TTCTACCGCA AGCACTATTA
AACTATCTAG TTCGTTTAGG TTGGTCTTAT GGTGATCAAG AGATTTTCTC TAAAGAAGAG
ATGATCGAGT TATTTAGTTT AGATGCGATA GGTCAATCAG CTTCAGCTTT TAATACTGAT
AAACTCATTT GGTTAAATCA GCATTATATT AAGGAGCTAC CAGTCAGTGA GGTGTTACCT
TATGCAAAAT GGCACTTTGA GCAACAAGGC ATCGATGTGT CTAACGGCCC TGCACTAGAA
GAGGTCATTA AAGTACAAGC AGATCGCGTA AAAACGTTGA AAGAGTTGGC CGAGATCAGT
GGCTATTTTT ATCAAGAGTA TGAAGACTTT GATGAAAAGG CGGCTAAAAA GCATCTTCGC
CCTGTGGCGC AAGAGCCTCT TGAGGCGGTT AAGGCTGCTT TAATGGCGTT ATCGACTTGG
AATGCTGAAA CCATCCATGA AGCGATTAAC AAAACTGCGG AAACTTTAGG GGTAGGTATG
GGCAAAGTTG GAATGCCATT GAGAGTTGCC GCTACCGGTT CAGGTAATTC GCCTTCACTT
GATGTGACAT TGAATTTGCT AAAACCTGAG CAAATTGCTC AACGTATAGA CAAAGCGCTC
ATATATATAG CAAACAGACA ACAATCATAG
|
|---|
| Protein sequence | MTAVTRFAPS PTGFLHVGGA RTALYSWLYA KSQGGKFVLR IEDTDIERST QEAIDAILEG
MEWLGLTWDD GPYYQTKRFD RYKALINEML EEGKAYKCFM SSAELDEIRE KQKANGEKPR
YPGTWRDRTD HPEGEPFVIR FKNPLEGKVL VKDHIRGNIE IANSELDDLI ILRSDGTPTY
NFCVVVDDWD MGITHVVRGE DHINNTPRQI NILQALGAPV PEYAHVSMIL GDDGKKLSKR
HGAVSVMQYR DDGFLPQALL NYLVRLGWSY GDQEIFSKEE MIELFSLDAI GQSASAFNTD
KLIWLNQHYI KELPVSEVLP YAKWHFEQQG IDVSNGPALE EVIKVQADRV KTLKELAEIS
GYFYQEYEDF DEKAAKKHLR PVAQEPLEAV KAALMALSTW NAETIHEAIN KTAETLGVGM
GKVGMPLRVA ATGSGNSPSL DVTLNLLKPE QIAQRIDKAL IYIANRQQS
|
|---|
| |