| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2897 |
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| Symbol | |
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| ID | 4174656 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3507711 |
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| End bp | 3510455 |
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| Gene Length | 2745 bp |
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| Protein Length | 914 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055911 |
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| Product | DNA polymerase III, subunits gamma and tau |
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| Protein accession | YP_662459 |
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| Protein GI | 109899204 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2812] DNA polymerase III, gamma/tau subunits |
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| TIGRFAM ID | [TIGR00678] DNA polymerase III, delta' subunit
[TIGR02397] DNA polymerase III, subunit gamma and tau |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.579528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTATC AAGTTCTAGC GCGAAAATGG CGGCCAAATA ATTTCAGTGA ATTAGTTGGT
CAAGAGCATG TAGTCGCAGC CATTTCAAAT GCACTTGATA ATGACCGCTT ACACCACGCT
TATTTGTTTA CGGGTACGCG AGGTGTGGGC AAAACCACTA TCGCACGGAT CTTTTCCAAG
AGTCTGAATT GCGAATTGGG CATGGGGTCA AAACCCTGTG GTAAATGCTC TACGTGTGTT
GAAATAGAGC AGGGCAACTT CGTTGATCTG TTAGAAATCG ATGCAGCCTC ACGCACAAAG
GTCGAGGATA CTCGGGAATT ATTAGACAAC GTACAATATC GACCCTCACG TGGTCGATAC
AAAGTGTACT TAATTGATGA AGTACACATG TTGTCTAAGC ATAGTTTTAA CGCTCTGCTT
AAAACCCTTG AAGAGCCACC GCCACACGTC AAATTCTTGT TGGCGACAAC CGATCCGCAA
AAGCTACCGA TCACGATTTT ATCTCGCTGC TTGCAGTTCA ACCTTAAAGC CTTATCACGA
GCGCAAATTG CTCAGCAACT ACAGCATGTT TTTGCCCAAG AGCAACTTCA AAATGCGCCA
GAAGCGCTGG CGCAAATAGC AAGAGCTGCA CAGGGAAGTA TGCGTGACGC TTTGAGTTTA
TCCGATCAAG CTATTGCCCA AGGCAATGGC AACGTCAGTT TGAGCATAGT CACCGACATG
CTCGGCTTAA TGGACAAAAC GCAAGTTCTC AAGTTACTCA ATGCTGTGCT GAATAAGCAA
AATGAGTCGG TGTTTGAATT GGTCGACTTT ATGTCTGAAC AAGCCGTCGA CTATAGCCAG
GTGCTGAATG AATTGATGAG TTTGCTACAT CAAGTCGCTT TGACCCAATT TGTACCTGAT
GCATGCAAAC TTGAGACTAT TTCCGCTCGG GCAATATATC AATTAGCAAA AAATGCACTG
CCTGAGCACA TACAATTGCT TTACCAAATT GCATTGCAAG GCAAGCGCGA TATGCCATTT
GCAGCGGATG CCAGAACAGG CTTGGAAATG ACACTGCTGC GCATGTTGGC CTTTAGCCCA
GTGCAAGTAA ATACTAGTGT TGAAGAGCTA GTGGCTATGA CCCCAAGCTC AGCACCGAGT
AGTGGGCCGA GTAGTGCACC GCTGCCAATG CGAGACAAAC ACGACCTTGT TACACCCACC
GACGACACGC CAGTTGAGTC TAAGGAAACG GTTGTAGCTG CGATGGCACA AGCTGAGGAA
GCGCCCCAAG CACCAATTGC CACTGAGATT GATAACACGC AAAGAGTGGC AGCGCCAAAA
GATGCGCCAT CTACAGCCAG TGACTCTACG TCTAACAATG ATTTTACTAA CGACAGTGAT
TTTACAGCCC GTCAGAACAC TCAACCCCTT GAGGTCATGG GCTCGAAAAG CGAGCGTGCA
GACAATGCGG CCACACAAAA TCAAGTGGAA GGGGCAGCAG CTGTTGAAAA GACACTAGCA
GATGAAACTT CAGCTCAGCC GTTTGATGAT GACGAATATC ACAGTGCACA AATGCAGGAC
ATGGAAGCGC AACAAGCAGG CATTTTGCAA GAAGCTGAGT ATTTTATTCA GCCGCAAACT
CAGCAACCGC ATGATACGAA TACAGCTGTC GACCATCAGC AAGAAGTCCA TCAACAAGAT
GCCTCGAAGC CGCAAAGTCA ATCTACCGAA AGTTTACTTG CGCTGCGCCG TAAACTCACT
CAGGCAACGG AAGATGAACA GGAGAATGTC CCTTCAGTAA AAAAGTCTGA AGGTGGTTAT
GATGCCAGTC AGTTTCTGCC TGGTGGCAGC GGGCCGGGTG TTGAACCAAT GGCTGGCGCA
ATTCCTAGGA ATCAGCCCGT CACGAAGCCT GCTTCTGCTG AAAGCCCGAG TTCACCCGAA
TCTCTACCTG AGCCGTCTTC ACCTGAGCAG TATTCACCTG AGCAAGCTAC GCCGTACACG
TATTCTGCTC AAGCAGATGC ACCTTATCCG AACGATGCTG ATGTACCTAA TGCGAATCAG
GCCGAGTTAG GGGAAGCACC GCCTTGGGCG ACAGATGATG CTAATAATCA AACCTCTCTT
AATGAATTCA ATGATATCAA TGACATTAAC GAAGTAACCG TTAACGAAGT CACTGGTGGT
GATGTATCTG TTAATGAACT AAGCCATGAG GCGCTAGCCC TTGATGAAGT GACGGTGCCC
GTTGACGCAC AAGAAGACAT AGCAGAAAAC CAACAAGAGA TTGAAAATAC CGTTTTCGAC
CCCACTGCTC ATTTAGCGCA AGATTTAGAA TGTGAGGTGG ACTATGAGGT ACCTGCATTT
CTTGAGTCGG GTGAGAAGGT CACAATAGCG CCCCAATTGG ATAAATGGAG CGCGTTGATA
ACACAGATGC AAGTGGCTGC GCTGACGAAG CAATTGGCGC TGCATTCTGA GTTCACTCAA
GATGGTGACA AAGTCGTGCT CAATTTGGTG CAAACCAAGG AGCACCTGAA TACCGATTCA
GCTAAAGAAC AATTGCAACG TGCACTGAGT GATGTGTTGC AACAACAGAT TACCCTAGAG
GTACATGTAG GTGACGCGAT TAACACGCCG TTTGCCTTAC AACAAAGTAT TAATCGGGTG
CGATTTGAAT ATGCCAAGCA AGTGGTCGAA ACTAATGAGT CCATTTGTAT GTTTAAAGAC
ATGTTCAACG CCCAAGTGCT AAATGATTCA ATCAAAGCAC GCTAG
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| Protein sequence | MSYQVLARKW RPNNFSELVG QEHVVAAISN ALDNDRLHHA YLFTGTRGVG KTTIARIFSK
SLNCELGMGS KPCGKCSTCV EIEQGNFVDL LEIDAASRTK VEDTRELLDN VQYRPSRGRY
KVYLIDEVHM LSKHSFNALL KTLEEPPPHV KFLLATTDPQ KLPITILSRC LQFNLKALSR
AQIAQQLQHV FAQEQLQNAP EALAQIARAA QGSMRDALSL SDQAIAQGNG NVSLSIVTDM
LGLMDKTQVL KLLNAVLNKQ NESVFELVDF MSEQAVDYSQ VLNELMSLLH QVALTQFVPD
ACKLETISAR AIYQLAKNAL PEHIQLLYQI ALQGKRDMPF AADARTGLEM TLLRMLAFSP
VQVNTSVEEL VAMTPSSAPS SGPSSAPLPM RDKHDLVTPT DDTPVESKET VVAAMAQAEE
APQAPIATEI DNTQRVAAPK DAPSTASDST SNNDFTNDSD FTARQNTQPL EVMGSKSERA
DNAATQNQVE GAAAVEKTLA DETSAQPFDD DEYHSAQMQD MEAQQAGILQ EAEYFIQPQT
QQPHDTNTAV DHQQEVHQQD ASKPQSQSTE SLLALRRKLT QATEDEQENV PSVKKSEGGY
DASQFLPGGS GPGVEPMAGA IPRNQPVTKP ASAESPSSPE SLPEPSSPEQ YSPEQATPYT
YSAQADAPYP NDADVPNANQ AELGEAPPWA TDDANNQTSL NEFNDINDIN EVTVNEVTGG
DVSVNELSHE ALALDEVTVP VDAQEDIAEN QQEIENTVFD PTAHLAQDLE CEVDYEVPAF
LESGEKVTIA PQLDKWSALI TQMQVAALTK QLALHSEFTQ DGDKVVLNLV QTKEHLNTDS
AKEQLQRALS DVLQQQITLE VHVGDAINTP FALQQSINRV RFEYAKQVVE TNESICMFKD
MFNAQVLNDS IKAR
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