| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2881 |
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| Symbol | |
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| ID | 4174640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3493336 |
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| End bp | 3494652 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638055895 |
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| Product | histidinol dehydrogenase |
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| Protein accession | YP_662443 |
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| Protein GI | 109899188 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0141] Histidinol dehydrogenase |
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| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.153344 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACAT GGTCGGGCCT AAACGAAGGC CAACAACAGG CATTGTTAAG CCGCCCAGCA
ATGGCGGACA ACAAGGCGCT CAGCAGTGCA GTGGCTGACA TTATTCAGCA GGTTGCCGAC
AACGGCGATA ACGCACTACG TGAATTAACC CGTCGCTTTG ATGGCGTTGA ACTGGGCGAG
CTAAGTTTGC CAACGGGTGA ACTGACTCGC GCCAAGCATG ACATTAGCCA TGACGTTAAA
ACCGCCATTG ATACGGCATA TGCCAATATT CATGCCTTTC ACAGTGCTCA AAAGCCAAGT
GATGTAAAAG TGGAAACGGC GCCGGGTGTG GTGTGTGAAT TAAAACATGC CCCGCTAGAT
TCTGTTGGTT TGTATATTCC TGGCGGCAGT GCGCCGCTTA TCTCTACTGT GCTGATGTTA
GGTGCGACCG CACAAGTCGC TGGCTGCCCA CGCAAGGTCT TGTGTACGCC GCCTAATAAG
CAAGGTGAGG TGCCAGCTGA AATACGTTAC GCCGCCAGCT TATGTGATAT CAATGAAGTG
TATTTAGTGG GCGGAGCGCA AGCGATTGCC GCCCTTGCTT TAGGCACTAA GACCATTACC
AAAGTGGACA AAATCTTTGG CCCAGGCAAC AGTTTTGTGA CCGAAGCCAA GCAGCAAGTC
AGTCGTATCC CTGCAGGCCC TGCGATTGAT ATGCCAGCAG GCCCATCAGA AGTGTTGGTG
ATTGCCGATG GCAAGGCGAA TCCTGTGTTC GTCGCGTCTG ATTTACTGTC TCAAGCGGAA
CACGGCGCTG ACTCGCAGGC GATTTTGGTC AGTGACTCAA AAGACGTGAT CAGCGCCACA
CAGCGAGAAG TTGAACGTCA ACTCGCCACC CTTAGCCGCC AAGACATTGC CCGCAAAGCC
ATGGCTCACA GCCGCTATAT TTTCACTGAT ACATTGGACA GCGCCATTGA TGTTAGCAAC
CAATACGCAC CTGAGCATTT GATTGTGCAA GTTGAAAACG CGCGCGCCTG TTTGCCTAAG
CTAAAAAATG CAGGCTCGAT TTTCGTTGGC CAATGGTCGC CGGAATCAGC TGGTGATTAC
GCCAGTGGCA CCAATCACGT GCTACCCACC TATGGCTATG CACGTAATTA TTCAAGCTTA
GGCTTAGCTG ACTTTATTCG CCGTTACACG GTACAAGAGC TAAGCGCCAG TGGCCTGCAA
AACATTGGCA GTGCCATCAT GGATTTAGCC CAAGCTGAAG GCTTAGATGC CCACAAGCAA
GCTGTTGCCT TACGTTTAGA GACCCTGGCA AATCAACAGG AGCAAGATAA TGGCTGA
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| Protein sequence | MQTWSGLNEG QQQALLSRPA MADNKALSSA VADIIQQVAD NGDNALRELT RRFDGVELGE
LSLPTGELTR AKHDISHDVK TAIDTAYANI HAFHSAQKPS DVKVETAPGV VCELKHAPLD
SVGLYIPGGS APLISTVLML GATAQVAGCP RKVLCTPPNK QGEVPAEIRY AASLCDINEV
YLVGGAQAIA ALALGTKTIT KVDKIFGPGN SFVTEAKQQV SRIPAGPAID MPAGPSEVLV
IADGKANPVF VASDLLSQAE HGADSQAILV SDSKDVISAT QREVERQLAT LSRQDIARKA
MAHSRYIFTD TLDSAIDVSN QYAPEHLIVQ VENARACLPK LKNAGSIFVG QWSPESAGDY
ASGTNHVLPT YGYARNYSSL GLADFIRRYT VQELSASGLQ NIGSAIMDLA QAEGLDAHKQ
AVALRLETLA NQQEQDNG
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