Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2840 |
Symbol | |
ID | 4174600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3442533 |
End bp | 3443213 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055856 |
Product | two component transcriptional regulator |
Protein accession | YP_662404 |
Protein GI | 109899149 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCATTT TAATTGTCGA GGACGACAGC CGTTTATTAA CTCAGTTAGA CACGCTTTTA CAAACCCATG GCTACAGTGT TGATTTAGCC GATGATGGCG CCAAGGCACT GTTTTTATTA AGTGAACACC CTTACGACTT AGCGATTATC GATATCGGTT TGCCTGTTAT GGATGGCTTT GAAGTCATTC AAAAAGCCCG AAAAAATAAT GTTTCTTGCC CTATCCTGAT TTTAACCGCG CGTGATCGCT GGCAAGAAAA AGTCGAAGGG CTAGATGCCG GCGCCGATGA CTACCTGACT AAGCCATTTC AAAACGAAGA ATTACTCGCC CGCGTTAAAG CTCTTATTAG GCGCTCTGCC GGTCAAGCTA ACCCCACGAT TGAACTTGGC CCTATCAGCC TAAATACCTT AAGCGAGCAA GTCAGCGTCA GCGGTACCGA TATTGAACTT ACGGCCTATG AATATAAGGT GTTTGAATAC CTGCTGCTCA ACCCAAAAAA GGTAGTGTCT AAAACCGAGC TTACCGAACA CATATACGAT CAAGACTTTG ATTTAGACAG CAACGTTATT GAAGTATTCG TTGGCCGCTT ACGTAAAAAA CTCGACCCAC AAGGAAGCAT CAACCCGATT GAAACCATGC GCGGGCGTGG TTATCGCATC AGCCGAGAAT TTCAAGTTTA A
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Protein sequence | MRILIVEDDS RLLTQLDTLL QTHGYSVDLA DDGAKALFLL SEHPYDLAII DIGLPVMDGF EVIQKARKNN VSCPILILTA RDRWQEKVEG LDAGADDYLT KPFQNEELLA RVKALIRRSA GQANPTIELG PISLNTLSEQ VSVSGTDIEL TAYEYKVFEY LLLNPKKVVS KTELTEHIYD QDFDLDSNVI EVFVGRLRKK LDPQGSINPI ETMRGRGYRI SREFQV
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