Gene Patl_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2815 
Symbol 
ID4174575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3416382 
End bp3417296 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content49% 
IMG OID638055832 
Producthomocysteine S-methyltransferase 
Protein accessionYP_662380 
Protein GI109899125 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGCGA GTACAAGTGC GAGTAAAAGT ACAATTACCA TACTAGATGG CGGCATGGGC 
CAAGAATTAC TGCGCCGAAG TTCCCGCGAC GTCACCCCTA TGTGGTCGGC TGACATTATG
CTTAATGAAC CAGAGCTAGT CAGAGATTTA CATCGGGAGT TTATCAACAG CGGTGCTCGC
GTCATTACAC TCAACACCTA TACCGCTACC CCACAACGCC TTAAGCGTGA AAACCAATTT
GAGCAATTTG TGCATTTACA TGATGCGGCG ATGCGCGCCG CTCAAGAAGC GATTGCGCTT
ACCCAAAGAG ATGATGTAAT GATTGCCGGT AGCTTGCCGC CGTTGGTGGC AAGCTATCAC
CCTGAAGTGT CTTTATCGTT TGAAGACTCG CTGGTGAGCT ACCGTCAATT GGTAGCATTG
CAATCGCTTG GCAGTGATAT CTTTATTTGC GAAACAATGT CGTCGATTTG TGAAGCCCAA
GCGGCCTGCA CGGCGGCCAA AGAAAGCGGC AAACCCGTTT GGGTAGCGTT TACAGTCAGT
GACACTGAGC CAGATCAGCT GCGCAGCGGC GAATTATTAA AAGACGCACT GGACGCATTA
AAAGCACTTT CGCCAGATGC CATAATGCTC AATTGCAGCT TACCAGAGGC CATCAGCGCT
TGTTGGTCTT TAATGCAACA ATCGAATGCG AAAATAGGGG CCTACGCAAA TGGTTTTGTC
TCGATCGATG CGTTATACCC TGGCGACACA GTAGAAGAAT TAGAAATGCG CAAGGATATG
AGCCCAGAAC AATACGCTGC TCATGCAATG CATTGGGTGC AAAACGGTGC TTCTATCATT
GGTGGTTGTT GTGAAATTGG CCCCGACCAC ATCAAGGCGC TACACAGCAA GTTGCAAAGT
GAAGGCTTGA TATAA
 
Protein sequence
MSASTSASKS TITILDGGMG QELLRRSSRD VTPMWSADIM LNEPELVRDL HREFINSGAR 
VITLNTYTAT PQRLKRENQF EQFVHLHDAA MRAAQEAIAL TQRDDVMIAG SLPPLVASYH
PEVSLSFEDS LVSYRQLVAL QSLGSDIFIC ETMSSICEAQ AACTAAKESG KPVWVAFTVS
DTEPDQLRSG ELLKDALDAL KALSPDAIML NCSLPEAISA CWSLMQQSNA KIGAYANGFV
SIDALYPGDT VEELEMRKDM SPEQYAAHAM HWVQNGASII GGCCEIGPDH IKALHSKLQS
EGLI