Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2815 |
Symbol | |
ID | 4174575 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3416382 |
End bp | 3417296 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638055832 |
Product | homocysteine S-methyltransferase |
Protein accession | YP_662380 |
Protein GI | 109899125 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2040] Homocysteine/selenocysteine methylase (S-methylmethionine-dependent) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGCGA GTACAAGTGC GAGTAAAAGT ACAATTACCA TACTAGATGG CGGCATGGGC CAAGAATTAC TGCGCCGAAG TTCCCGCGAC GTCACCCCTA TGTGGTCGGC TGACATTATG CTTAATGAAC CAGAGCTAGT CAGAGATTTA CATCGGGAGT TTATCAACAG CGGTGCTCGC GTCATTACAC TCAACACCTA TACCGCTACC CCACAACGCC TTAAGCGTGA AAACCAATTT GAGCAATTTG TGCATTTACA TGATGCGGCG ATGCGCGCCG CTCAAGAAGC GATTGCGCTT ACCCAAAGAG ATGATGTAAT GATTGCCGGT AGCTTGCCGC CGTTGGTGGC AAGCTATCAC CCTGAAGTGT CTTTATCGTT TGAAGACTCG CTGGTGAGCT ACCGTCAATT GGTAGCATTG CAATCGCTTG GCAGTGATAT CTTTATTTGC GAAACAATGT CGTCGATTTG TGAAGCCCAA GCGGCCTGCA CGGCGGCCAA AGAAAGCGGC AAACCCGTTT GGGTAGCGTT TACAGTCAGT GACACTGAGC CAGATCAGCT GCGCAGCGGC GAATTATTAA AAGACGCACT GGACGCATTA AAAGCACTTT CGCCAGATGC CATAATGCTC AATTGCAGCT TACCAGAGGC CATCAGCGCT TGTTGGTCTT TAATGCAACA ATCGAATGCG AAAATAGGGG CCTACGCAAA TGGTTTTGTC TCGATCGATG CGTTATACCC TGGCGACACA GTAGAAGAAT TAGAAATGCG CAAGGATATG AGCCCAGAAC AATACGCTGC TCATGCAATG CATTGGGTGC AAAACGGTGC TTCTATCATT GGTGGTTGTT GTGAAATTGG CCCCGACCAC ATCAAGGCGC TACACAGCAA GTTGCAAAGT GAAGGCTTGA TATAA
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Protein sequence | MSASTSASKS TITILDGGMG QELLRRSSRD VTPMWSADIM LNEPELVRDL HREFINSGAR VITLNTYTAT PQRLKRENQF EQFVHLHDAA MRAAQEAIAL TQRDDVMIAG SLPPLVASYH PEVSLSFEDS LVSYRQLVAL QSLGSDIFIC ETMSSICEAQ AACTAAKESG KPVWVAFTVS DTEPDQLRSG ELLKDALDAL KALSPDAIML NCSLPEAISA CWSLMQQSNA KIGAYANGFV SIDALYPGDT VEELEMRKDM SPEQYAAHAM HWVQNGASII GGCCEIGPDH IKALHSKLQS EGLI
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