| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2804 |
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| Symbol | |
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| ID | 4174564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3403450 |
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| End bp | 3405108 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055821 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_662369 |
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| Protein GI | 109899114 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.456781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAAAAAT CCTGGTTAAA GAGTTATGAC GCTCGAGTAC CTCATGAAAT CAATCCTGAT
AGTTATGCGT CTATCGTTGA TATTTTAGAG CAAGCAGTAT CAACTTACGC CGATAGTGTA
AGCTACATCA ATCTAGGTAA ATCAATTACC TTTAAAGAAC TAGACCAGCA ATCTAAGCAG
TTTGCAGCGT ATCTTCAGCA TTCAGGGTTA AAGAAGGGCG ATGCCGTCGC CATTATGATG
CCTAATTTAT TACAATATCC AGTTGCCTTA TTCGGCGTAC TACGCGCGGG TATGGTCGTG
GTAAATGTGA ATCCGCAATA CACCGCGCGC GAACTAAAAC ATCAACTTAA TGATGCAGAC
GCTAAAGCCA TTGTGATCGT TGAAAATTTT GCTTGCACCT TAAGTGAAGT GATAGACGAC
ACGCCAGTTC AAACGGTCAT GTTGACCCAA ATTGGCGATA TGTTGGGTTT TCCGAAAAAG
TGGCTGACTA ATCTCGTGGT TAAACATGTT AAGAAGATGG TGCCTGCTTT TTCTTTACCG
TCAGCCATAC ACTTTATGGA CGCGATGAAA GAAGGGGCGA GCAAACGTTA TGAGCGCCCA
ACCTTAACTG GCGATGACAT CGCATTTTTG CAATACACTG GCGGCACAAC TGGAGTGTCT
AAAGGCGCTA TGTTGAGTCA CAGGAATATG GTGGCGAACT TAGAGCAAGC GTCTGCTATT
TTAAATACTG TCACGGTGCC CAATGAAGAG CTAGTGGTCA CGGCATTACC GCTTTACCAT
ATCTTTGCTT TGCAGGCGAA CTGCCTATTG TTCTTAAAAT TGGGCTGTGC CAACTTATTA
ATTACCAACC CCAGAGACAT GCCGGCGTTT GTATCCGAGT TGGGTAAGTA TCCCTTTACT
GTGCTCACTG GGGTAAACAC GCTATTTAAT GGTTTGCTTA ATACGCCAAG TTTCACCGAA
CTTGATTTCT CAAAGGTCAA ATTCTCATTG GGCGGTGGTA TGGCGGTACA ACGCTCAGTC
GCAGAACGCT GGTACAAGTT AACGGGACAT GTGCTACTTG AAGGATATGG TTTAACCGAA
TGTAGTCCTA TTGTCAGTGT GAACCCACCG CAATTGGAGC AATACAACGG CTCTATTGGC
TTGCCATTAC CCTCTACTGA TATTCGCTTA GTGGATGATG ACGGCGTTGA CGTTGCGCCC
GGTGAAGCAG GTGAGATGCT AGTAAAAGGA CCACAAGTCA TGGTCGGGTA TTTAAACCGA
CCCGAAGCCA CTGAAGAGAT CATGCAAGAT GGTTGGCTTG CTACAGGGGA TATTGCCCGC
TGTGATGAAG ACGGATATTT CTACATAGTT GATCGCAAAA AAGACATGAT TTTAGTCTCT
GGCTTTAATG TTTTCCCGAA TGAAATCGAA GAAGTTGCCG CGATGCATGA CCATATTGTT
GAAGTAGCAG CCGTGGGCAT TCCCCATGAA GCGTCTGGTG AGGTTGTGAA ACTTTACGCA
GTGCGCCGTG AAGACAGTTT GTCAGAGCAA GATGTTATCG AACATTGCCG TAAACACTTA
ACCGGATATA AAGTTCCGAA AAAAGTTGAG TTCAGAGACG AGCTTCCAAA ATCGAATGTT
GGTAAGATAC TCCGCAGAGA ACTTCGCGAC GAGAAATAA
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| Protein sequence | MEKSWLKSYD ARVPHEINPD SYASIVDILE QAVSTYADSV SYINLGKSIT FKELDQQSKQ
FAAYLQHSGL KKGDAVAIMM PNLLQYPVAL FGVLRAGMVV VNVNPQYTAR ELKHQLNDAD
AKAIVIVENF ACTLSEVIDD TPVQTVMLTQ IGDMLGFPKK WLTNLVVKHV KKMVPAFSLP
SAIHFMDAMK EGASKRYERP TLTGDDIAFL QYTGGTTGVS KGAMLSHRNM VANLEQASAI
LNTVTVPNEE LVVTALPLYH IFALQANCLL FLKLGCANLL ITNPRDMPAF VSELGKYPFT
VLTGVNTLFN GLLNTPSFTE LDFSKVKFSL GGGMAVQRSV AERWYKLTGH VLLEGYGLTE
CSPIVSVNPP QLEQYNGSIG LPLPSTDIRL VDDDGVDVAP GEAGEMLVKG PQVMVGYLNR
PEATEEIMQD GWLATGDIAR CDEDGYFYIV DRKKDMILVS GFNVFPNEIE EVAAMHDHIV
EVAAVGIPHE ASGEVVKLYA VRREDSLSEQ DVIEHCRKHL TGYKVPKKVE FRDELPKSNV
GKILRRELRD EK
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