| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2785 |
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| Symbol | |
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| ID | 4174545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3379691 |
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| End bp | 3380629 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055802 |
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| Product | auxin efflux carrier |
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| Protein accession | YP_662350 |
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| Protein GI | 109899095 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000625681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATCC AATCACTACT GTTTGCCGTT GAAGTGACCT TGCCCATCAG TCTGCTAATT
GTACTGGGGA TCATATTTAA GCGTATTCGC TGGATAAACG AAGAATTTGC CATAATTGGC
TCGCGGTTGG TATTTAACGT GACTTTGCCG TGTTTGCTAT TCGTTAATAT TGCTAAAACC
GACTTAAGCG TTACTACACC CACTTACTTA CTGGTGTTTG CCGCCATTGC CACCACAATC
ACGTTTTTGC TTTTCAATTT ATTCGCATTG AAGATAGAGC GCCAAGATGC ACGTGGCGCG
TTTGCTCAAG GAGCGTGCAG GGGCAATATG GCGATTATCG GTTTGGCGTT ATCCGTTAGC
GCATTTGGCG AGACCGCACA GGCGTTAGCA TCTATGTATC TAGCGGCCAT TGTCATCCTG
TATAACGTGT ATTCCATCTT AACTCTTTAT TACCATCAAG CAGCAACCGC TTCGTTGAAA
TTGGTCACCT TGAGTGTGAT TAAAAACCCG TTGGCGATTG CTATTGCGCT AGCCATATTG
GTCGCACTTG TACCTATTCC TTTACCTGAT CTTCTGTATG AGTCTGGCAG CTATCTGGCG
CAAATGACAT TACCGTTAGC ATTGTTATGC GTAGGAGCAT CTATTCGTTT ACAAGAATTT
AAAGCGTCTA AGTTGTTGTA TATTGCGATA GCCAGCAAGA TTGTGTTTAT CCCGCTGGTC
ACTACTGTCA TTGGTTATTA TTGCGGGCTT AAAAATGAAG CGTTAGGGGT GTTATATATC
ATGATGGCCA CACCCACCGC AGCGGCTGCT TATCCTATGG TACGTGCGAT TGGTGGAGAC
CATCATCTTA CTGCAGCGAT TATCGCCGGC AGTACCTTGT TCTCGATGTT TACCACCACC
CTTGGGTTGT TTTTATTGCA CCTGCTGAGC TGGGTTTAA
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| Protein sequence | MPIQSLLFAV EVTLPISLLI VLGIIFKRIR WINEEFAIIG SRLVFNVTLP CLLFVNIAKT
DLSVTTPTYL LVFAAIATTI TFLLFNLFAL KIERQDARGA FAQGACRGNM AIIGLALSVS
AFGETAQALA SMYLAAIVIL YNVYSILTLY YHQAATASLK LVTLSVIKNP LAIAIALAIL
VALVPIPLPD LLYESGSYLA QMTLPLALLC VGASIRLQEF KASKLLYIAI ASKIVFIPLV
TTVIGYYCGL KNEALGVLYI MMATPTAAAA YPMVRAIGGD HHLTAAIIAG STLFSMFTTT
LGLFLLHLLS WV
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