Gene Patl_2784 details

Gene Information

• Locus tag: Patl_2784
• ID: 4174544
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudoalteromonas atlantica T6c
• Kingdom: Bacteria
• Replicon accession: NC_008228
• Strand: +
• Start bp: 3379058
• End bp: 3379660
• Gene Length: 603 bp
• Protein Length: 200 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 638055801
• Product: hypothetical protein
• Protein accession: YP_662349
• Protein GI: 109899094

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000283407
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCAAG CCGCTTACGA ACAAGCCGTC AATCTAATCG ATAGCGCTAA CAGTGAAGAT 
CCTAATATAG AGCAAGCCGA AGGCAAAGAG TGGCCAAAAG AGCTGCTGTA TAGTTTACGC 
ATGTCAAACA TGTTAGAGCG CTATCGAAGC GATGCGGATC ACGTGGTTAA ATTGGCCATT 
CGCGGGCAAC ACATACAGCG TTGGCATTCT CCGCGCAGTG CTTACCCTAT GGATCGTCAG 
GGTTATCATC AATGGCGTAG CGACTTATAC ACCTTTCACG CAGATAAAGT CGCTGAGGTA 
ATGCAGCAAG CGGGTTTTAA TGAAACGGAC GTGGCAAGAG CAAAAAAAGC GGTCGCCAAA 
GTGGGTATAA AATCAAATCC AGATACACAA CTACTAGAAG ACGTGGTGGG TCTGGTGTTC 
ATTGAGCACT ATATGTTGGC GTTTGCCGCC AAGCACGCTG ATTACACAGA GCAGAAGTGG 
ATAGATATCA TCCGCAAGAC GTGGATGAAG ATGTCAGATG ATGCACACGC GTTTGTGTTG 
GCAGGTAAAG TGGCCTTGCC GGAATCTTTG ACGCCGATCA TTTTGAAAGC GGTGCAAGCT 
TAA 

 

Protein sequence

MTQAAYEQAV NLIDSANSED PNIEQAEGKE WPKELLYSLR MSNMLERYRS DADHVVKLAI 
RGQHIQRWHS PRSAYPMDRQ GYHQWRSDLY TFHADKVAEV MQQAGFNETD VARAKKAVAK 
VGIKSNPDTQ LLEDVVGLVF IEHYMLAFAA KHADYTEQKW IDIIRKTWMK MSDDAHAFVL 
AGKVALPESL TPIILKAVQA