| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2775 |
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| Symbol | |
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| ID | 4174535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3367607 |
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| End bp | 3368836 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055792 |
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| Product | hypothetical protein |
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| Protein accession | YP_662340 |
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| Protein GI | 109899085 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0520922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTG TTATCTTATT GAAAACCGCC ATCACCGCCT TAAAAGTCAA TGTATTGCGT
AGCTGTCTAA CTATGCTGGG GATCATTATC GGTGTAGCTG CTGTCATTAT TATGGTGGCG
ATGGGCGCAG GCGCTCAGCA AAAAGTGGAC GAGCAAATTA AATCCTTGGG AGGCAATGTG
TTTTTTGTCA CCGGATCTTT TCGACAAAGC GGTGGAGCGC GCTCTGCATC CGTGGTCAAA
ATTAATGAAG ACGACGCAAA TCTTATAGAA AAACAAGTAC CAGGGGTCGA AGCTGCAGCG
CCTTACCTGT CTGCCTCGGG TCAGGTCATT TTTGGTAATC TAAACTGGTC CACTGAAATA
AACGGGATCG ATAATCGTTA TTTTTTGGTG CGAGATTGGG ACATGGCCAA CGGGCGAGAA
TTCACCAGCG CCGAAATTAA TCGTGGCAGC AAAGTGGCAA TAATCGGAGA GCGCTTGCGC
AGCGAGCTAT TTGGCGCCAG CGACCCTATC GGTCAGACGG TACGTGTCAC TAATTTTAAT
GTCACCATTA TTGGGGTGCT CGCAGCCAAA GGGCAAGATG CCAGAGGCCA AGATCAAGAT
GATGTGATTT TTTTACCAAT TAAAACCGTG CGCAATAAGA TAACAGGAGT CAGTGCTACC
AACCCTAAAT CAGTAAGCTT TATTCAAGTC AGTGCCTATG ATGGCGAAGA CATGGATTAT
ATCGAAGAAG AGATGTCACG CTTATTGCGC CAGCGTATGC GCATTCCAGT GGGCGGTGAT
GACATGTTCC GTATTCGCAA TGTATCCGAA ATGATTGCCA CGCGGGCGGA AACTATTCAG
GTCTTCAATA CCTTGCTGGC TTGGGTTGCC TCGGTAAGCC TGGTCGTTGG CGGTATCGGT
ATTATGAATA TTATGTTGGT GTCGGTCACT GAGCGTACCC GAGAAATTGG CTTGCGTATG
GCGGTGGGGG CCAAGCCTTC GGATATACTG TATCAATTCT TGATTGAATC CATTGTATTG
TGCGGCTTGG GTGGCTTTAT TGGTGTCATG ATAGCCAACG GTTTTGTCTT TATGGGCAAT
CAATATGGGA TTGGGGCAGG GGGGATCATT GAAACACAAG TAGTACTGTT AAGTTTAGGC
TTCTCAGGGC TTATTGGGGT ATTTTTCGGT TACTACCCAG CCCTGAAAGC ATCGCGATTA
GCACCGATTG ACGCCCTGCG TTACGAGTAG
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| Protein sequence | MKIVILLKTA ITALKVNVLR SCLTMLGIII GVAAVIIMVA MGAGAQQKVD EQIKSLGGNV
FFVTGSFRQS GGARSASVVK INEDDANLIE KQVPGVEAAA PYLSASGQVI FGNLNWSTEI
NGIDNRYFLV RDWDMANGRE FTSAEINRGS KVAIIGERLR SELFGASDPI GQTVRVTNFN
VTIIGVLAAK GQDARGQDQD DVIFLPIKTV RNKITGVSAT NPKSVSFIQV SAYDGEDMDY
IEEEMSRLLR QRMRIPVGGD DMFRIRNVSE MIATRAETIQ VFNTLLAWVA SVSLVVGGIG
IMNIMLVSVT ERTREIGLRM AVGAKPSDIL YQFLIESIVL CGLGGFIGVM IANGFVFMGN
QYGIGAGGII ETQVVLLSLG FSGLIGVFFG YYPALKASRL APIDALRYE
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