| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2756 |
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| Symbol | |
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| ID | 4174516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3345789 |
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| End bp | 3348014 |
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| Gene Length | 2226 bp |
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| Protein Length | 741 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055773 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_662321 |
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| Protein GI | 109899066 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000284329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTACGT TTGTAAAGAA GGGGTATCTT GCTACCGCGA TAGCGGCTGT TTTAGCGTCA
ACATTTTCTC CGGTTATGGC GCAAGAAACC GCAGAGAGTT CGGTGACTAA AAATGAAGCT
GCTCAGAATG ATGTAGCTAA GAATAAAGAA CTAGAAAAAA TCGTGGTTAC CGCACAAAGA
CGTGCTCAGT CTATACAGGA AGTCCCCGTC GCTGTTACCG CTATTGGTGC TGCAGATCTA
GAACTAAAAC AAGTCACCAA CGTGTTGGAC TTACAATACG AAATTCCTAA TATCAGTTTG
GCAACAAACA CCGGGACTGC CAGCGGTGCA CGGATATTTT TACGTGGCGT AGGGGAAGAC
GAATCTCGTG TGTCAGCCGA CCCGGCAGTG GGCGTCTATG TCGATGGTGT ATATGTTGGT
CGCCAAGTAG GCGCTCTATT TGATTTAGTC GATTTGGAGC GAGTAGAAGT GCTACGCGGC
CCTCAAGGGA CCTTGTACGG ACGTAACTCC AACGGTGGCG CGATTAAACT GATCAGCAAA
GCACCAGAGT TAGATGAAAA TTACGGTCTG GTAAAAGCCA CTGTGGGCAG CGATGGCCGT
TTAGACGGTC GCTTTACTGG CAATGTCGGC TTGTCAGATA CCACAGCAGT CCGTGCTACC
GTGCTAAGTA AATCTCGCGA TGGATTTCAC ACGGTGAACC CCAATGGTGA CTTTGCCGAC
CAAGCCGGTA CTGAGGCAGG TGAGAAAGAC ACCAAAGCAT TTCGTATCGC CTTGTACAAT
GAATTTAGCG AAGATTGGAA TATGAATCTC GCCTTTGATT ACACCAAAGA TGATTCTGAC
CCTGTGCCAG ACACCGTCGC GTTAGCCAAT GATGCGGATA ACAATTTGTT CACCATCGAA
CCTGTGCCAG GCGTGACCTG TTCCGCCGCA ACGCCAGCTG CATTTTTGAG CTTAGGCTGT
TTCAATGATT ATCGCAGTGA AGTCGAAACC AGTGGTTTAT CGCTAAATGT GCAAGGACAA
ATTGGTGAAT ATGACCTTAG CTTTTTAACC GGTTATCGCC AGATGGAAGA TGACCTATCA
AGTCGCATCG GCTTTCCTTA CAGCCAACAA ACTGACCAAA ATCAATTTAG CCAAGAAATC
ACTTTAACAT CCAACTATGA AGGGGCATTT AACTTCGTCA CAGGTGTTTA TTACTTCACA
GAAGATGTAC AGATGGATTC AATATTTGTC TTTCCTTCTG AGTTAGGCGT AGAAACCGAA
GCCTATGCTG CATTCTTACA GACCACCTAT GAATTTAATG AAACGTTAAC CCTGACCACA
GGAATTCGCT ATACCGACGA AACCAAAGAG ATTGATGCTC TGATGCCTGT CAGCGGTGGT
AATCGAAATG AAGAGCTGGA TTTTAGCAAT ACCACCTACA ACATAGCGTT AAACAATCAA
TTTACGGATG ATGTGATGGG CTATGTGTCT TACTCAACTG GCTTTAAGAG TGGCGGTTGG
TCACCGGATT GCTTCGGAGT TGAGACAGCG TGCTTTTTAC CGGTTGACGA AGAAGAGTTA
GACGCGTTTG AAGTCGGTGT GCGCAGTGAT TTATTGGATA ATCGCCTGCG TTTGAACGCA
ACCTACTTCT ACAACAATTA CGATAATTTG CAAATCGCTT CCACTGTACC TGGATTAGGA
TTCACTCGCT TTAATGTCGA TGAAACTAAA ATCAGTGGTA TCGAATTAGA AGCGTTGTTT
GAAATGACTG ACAGCCTTAC CGTTAATGTG ACATTCGGTA CCATAGATGG CGAATATACA
GAAATGACAC TGGCCCAGGC TGGCGGTTTA ACCAACAGTG GTTCAAGCCC AGGTTGCAAT
GGCGAAGTCT CTATTGAATG TGCCAAAGCA TTAGAGCTTA AGAACGCACC GGATTATAAA
GGCACCATTG GTTTTACCCA TAGAATGCCA ATTGCTGAAG GCTTGCTGAC CAGCCGCATT
GATTTCTCCT TTGAAGATGA TTCATACAGC TTAGTGGCAA ATGCACCTGC CCACTCACTT
ACCTCCGTAG GCACTATCAT TAACGCGCGC ATTGCGTATG AGCCAAACAG CGAAAAATGG
GCCGTCGCTT TGTGGGGCAA AAACCTAAGT GATGAGGTGT ACTCACGCGC CGCTGCCGCA
GGGGATTTTA CCCAATACGT AGCGGACCCG CTCACCTGGG GTGCTGATTT TGAATATAGA
TTCTAA
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| Protein sequence | MSTFVKKGYL ATAIAAVLAS TFSPVMAQET AESSVTKNEA AQNDVAKNKE LEKIVVTAQR
RAQSIQEVPV AVTAIGAADL ELKQVTNVLD LQYEIPNISL ATNTGTASGA RIFLRGVGED
ESRVSADPAV GVYVDGVYVG RQVGALFDLV DLERVEVLRG PQGTLYGRNS NGGAIKLISK
APELDENYGL VKATVGSDGR LDGRFTGNVG LSDTTAVRAT VLSKSRDGFH TVNPNGDFAD
QAGTEAGEKD TKAFRIALYN EFSEDWNMNL AFDYTKDDSD PVPDTVALAN DADNNLFTIE
PVPGVTCSAA TPAAFLSLGC FNDYRSEVET SGLSLNVQGQ IGEYDLSFLT GYRQMEDDLS
SRIGFPYSQQ TDQNQFSQEI TLTSNYEGAF NFVTGVYYFT EDVQMDSIFV FPSELGVETE
AYAAFLQTTY EFNETLTLTT GIRYTDETKE IDALMPVSGG NRNEELDFSN TTYNIALNNQ
FTDDVMGYVS YSTGFKSGGW SPDCFGVETA CFLPVDEEEL DAFEVGVRSD LLDNRLRLNA
TYFYNNYDNL QIASTVPGLG FTRFNVDETK ISGIELEALF EMTDSLTVNV TFGTIDGEYT
EMTLAQAGGL TNSGSSPGCN GEVSIECAKA LELKNAPDYK GTIGFTHRMP IAEGLLTSRI
DFSFEDDSYS LVANAPAHSL TSVGTIINAR IAYEPNSEKW AVALWGKNLS DEVYSRAAAA
GDFTQYVADP LTWGADFEYR F
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