| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2728 |
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| Symbol | |
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| ID | 4174488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3321371 |
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| End bp | 3323257 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055745 |
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| Product | hypothetical protein |
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| Protein accession | YP_662293 |
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| Protein GI | 109899038 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000615794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCCGCA CTGCAATAAC AATGGCCTTA ACTGTCGCCG CAACTATGGC TTCTAGCTTC
TCAGTATCTG CAAACAGTGC AACCTCTATT GAGAAAAGTG TTAAAAAGGT GTCTGAAAAA
GACGTCGAAA AAATTAACAT CGAAGGCTCA GCTACAGCGA ATGAATCACC GGTTGGCACC
TTCAACTCTC CCATCTCTAA TTTAGAATAC GACCCTAGAG TCGATCTGCA GTCTAGAAAC
ATGGCTGAAG CACAAGCTGA TGTCACCATC CGCGGCGGTA TCTTCGAAAA CACCGGCTTT
AGTGTGGGCA GCGCCACCCT TGTCGATCCG CAAACTGGCC ATTACGTGGC TGAAATTCCT
ATTGCGCCAG AAATGCTCAC GGCACCGGCT ATTTTAACCG GTGTCGATAA TTCACTTTAC
GGCGCAAATA GTTCAGTGGG CTCAGTGGCC TACAAATGGC GACCTATTCA AACTGCTGGT
AGCGTTTCAT TAGGCGCTGG CAGAAATAAC TTTAATATGC AAAGGGTACA CAACGCCATT
TCTTGGTCGG TGGATGATTC TTCACAGTGG AAAGCTGGCG GTGAAGGTGA ATATTCGCGC
TCTGAAAGCG ATGGCACCAT AGACAAGGGG GATCACCGTT TCGAACGGGC ATCTGGGCGG
GTGCAGCTCA TAAGCGACAC CTCGCAAACG GATCTCTTTT TCGGTTATCA ACAAAAGTTT
TTTGGCTGGC CTAACCTGTA TACCCCTTTC AACGTGAATG AAACAGAAGA TTTAGAAACC
CGTTTGTTGA TATTTAATCA CCAGCAGCAA TATGCTCAAG AAAGCACCGT TGAAGTGTCA
GCTTATTACC GACAGCAAAA CGATCACTAT GTATTTTCAC GGGAAAACCC AGAGGCTTTT
CAAGCTTTTC ACGAAACCAA GGTAAAGTCA GTGGCAGTAT CGGGTCGGCA TATGACAGAT
TCAAAACTGG CGCTGAACTA TGCAGCGCAG TTCACAGCGG ATGAGATTGA ATCGACCACC
CTTGAGAACA ACTTCACCTC GCGGGATTAC TACAAGTTCA GTGTGGTGCC TGAGTATGCA
GTTGCCTTGC AAGACAACGA ACAATTAACG TTTCGTGTTG GGGCGGCATT TGATGACACC
AATCGCGATG ATTCGCGGGT ATCCGTGATA AGCGATATCG TTTGGCTTAA AACAAACGCA
GACAAGTCTA CACGGACGGT GAACTTTTCA TATTCTGAAG CCACACAAGT CGCAGGGTAT
ACCGCCATTG GTGGAAGTAC CTCCAGTGGA TTGTTTAGAA GCAATGACAC ACTTGAGCGT
GAAACCAGTA AAAACCTAGA GTTGGGCGTG TCGTTAGATA AAGCCTCGTG GCGCGTAGAT
TCTGCTGTGT TCTACCGCTG GGACAACGAA CTCACTGATT GGACTTACCG CTTTGACTCT
ACATCCGCAC GGGTGGCAAA CCCAGTTGAT ATCGAAACCA TAGGGGTTGA ACTGATGGCA
ATTGCTCGTT TAGAAAGCGC AGATGTCGTG ACGAGCTATA CCTATCTTGA TAAATCTGAA
GACTATCGAG ATGAAAATAT AGACGCAAGT TTCTACGCGC TAAACTATCC TCCCCATCGA
TTCACCTTGG GTGTGATTTG GTATCCCGCT GAAGCGCTTG AGCTCAAAGT AGATAATGAA
TGGCGAAAAC AAGAAGACAA CCTGTTGAGA AATGGCGGCG ATAGCGCTTT TTTCACCCAT
ATCTCGTTGA CCTATTCACC GCCACAGATA GACGGCTTTA ACGTGGTGGT GGCGGTTGAT
AACTTGTGGG ATGAATCTTT TGAAGAGATC CCCGGCACGC CAGGGCGCTC TGATCAATTA
TCTGTTACAG CAAGCTACTT TTGGTAA
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| Protein sequence | MLRTAITMAL TVAATMASSF SVSANSATSI EKSVKKVSEK DVEKINIEGS ATANESPVGT
FNSPISNLEY DPRVDLQSRN MAEAQADVTI RGGIFENTGF SVGSATLVDP QTGHYVAEIP
IAPEMLTAPA ILTGVDNSLY GANSSVGSVA YKWRPIQTAG SVSLGAGRNN FNMQRVHNAI
SWSVDDSSQW KAGGEGEYSR SESDGTIDKG DHRFERASGR VQLISDTSQT DLFFGYQQKF
FGWPNLYTPF NVNETEDLET RLLIFNHQQQ YAQESTVEVS AYYRQQNDHY VFSRENPEAF
QAFHETKVKS VAVSGRHMTD SKLALNYAAQ FTADEIESTT LENNFTSRDY YKFSVVPEYA
VALQDNEQLT FRVGAAFDDT NRDDSRVSVI SDIVWLKTNA DKSTRTVNFS YSEATQVAGY
TAIGGSTSSG LFRSNDTLER ETSKNLELGV SLDKASWRVD SAVFYRWDNE LTDWTYRFDS
TSARVANPVD IETIGVELMA IARLESADVV TSYTYLDKSE DYRDENIDAS FYALNYPPHR
FTLGVIWYPA EALELKVDNE WRKQEDNLLR NGGDSAFFTH ISLTYSPPQI DGFNVVVAVD
NLWDESFEEI PGTPGRSDQL SVTASYFW
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