Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2725 |
Symbol | |
ID | 4174485 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3316948 |
End bp | 3319122 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 638055742 |
Product | sulfatase |
Protein accession | YP_662290 |
Protein GI | 109899035 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3119] Arylsulfatase A and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0744828 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCGTT TTTTTGCATG TCTAATATTG ATGACCTCTT TCAATATCAA GGCAGTAGAT GAGCAACCAA AAAACATCGT TATTATTCTG GCTGATGATC TTGGTTGGAA TGACACAACT ATATTTCAAC CGAGTCAATT TTTAGAAACA CCTAATATCA ATGCACTTGC GGCGAAAGGC ATGATTTTCA GCCAGGCTTA CGCTAATAGT CCACTGTGCT CTCCTACTCG CGCTACTCTA CTTACCGGGC AAACACCGGC GCGTCATGGC TCAACTGCAC CAAGTCATCA TTTGCCTGTC GTGAGGTTAA TGCCTTCATT ACCAGCTTCC GCGGCTACAA ATAGAAAGTC TATTGCGCCA CAAACGGTTA CACGTCTTGA CACAGCATTA CCTACTCTAT CTTCTATAGC AAAGGCCAAC GGCTATCACA CAGCACACTT CGGTAAATGG CATCTTGGGG CGCACCCTTA TAGTCCTTCG GAGCACGGTT TTGATATAGA TATACCTAAT TTTCAAGGAG CCGGCCCCAC CGGCGGGTAT CTTGCTCCTT GGTCATTCGC GCCCGATATT CAGCCACAAA TTGCGGGTGA ACATATCGAT ATTCGACTCG CCAAAGAGGC AAAAAAATGG ATATTTAGTG TGAAAGATGA TGGCCCCTTC TTTTTAAATT TTTGGGCCTT TTCGGTTCAT GCTCCATTTA ATGCAGACGC TGACGAGATC GATTATTTTA TCAATAAGCG CTCTGGATTT CATAGTCAAC GTAATGCCAC TTATGCGGCG ATGGTGAAGC AATTCGATGA CGCTATTGGT GTCTTGTGGC AAGCCTTGGT AGAAGCGAAA GTAGAAAAAA ATACCATTAT TATTTTCACC TCAGACAATG GTGGCAATAT GTATACTGTT GTAGGAAACA CACATGCAAC GAGTAACTTT CCTCTGAAAG GAGGTAAGGC CACTGAATAT GAAGGAGGCT TAAAAGTGCC TACGGCGGTT ATTTGGCCGG GTCTTACACA GCCGAATACG TTGAGTAATA CACCTATTCA AACGGCAGAT TTCTTTCCTA CGTTACTCAA TGGAGTTAAC TTGTCGTGGC CATCAACTCA TATTGTTGAT GGTCGAGATA TTCGGCCAGT TTTACAAGGT GGTACCTTAG AGACGCGTGC TATTTTTACT TATTATCCGG CTGAGCCAAA AGTGCCAGAT TGGCTCCCAC CCTCGGCCAC TGTTACCTTA GATGGTTGGA AATTGATCCG TACGTTTCAT TACGGTAAAT CTGGGACCCA TCTTTATAAA CTTTATAATC TTAATCTTGA TCCCTCTGAG TCTACTAATT TAGCTAACAC TCAGATTCAC AAAGTAAGTG AACTTGACGC ACTTCTAGAG GCGTATTTAC TAGAAAGTGA AGCGGTAATT CCGATCGTTA ATACTGGTTA TCGCGATGGT ACTTTTAATT ACAATACCAT CGGAGTAGAA AAGGAAAGCT ATCAATTACC GGAAGAAAAA ATTTATTCTG ACATTCACTT TCAAATTAAA ACTGATCAGC ACGTCATTGA TGGGGGGGAT ACGGCAAAAT TCGTATATCA ATTAAGTCAC CATAGTAATA ACGCGTCAGT CGCCTATAAA CAATTTATGG GTCCAGCAGT TACGTTAGCT GCGGATGGAA ATAGCATAAG CTTCGTAGCG CCAGAGGTGA CTCAGGCAGA GTATGTGGGT TTAGCGTTTA TTGTTAAGGA TCAAGATAAA ACGATTAGGA AGCAAATTGG GGTGCGTATT AATCCAACCC AAGTTGCTCC TAGTTTAACC ATCTCTCAAG TTACGCAGAG CATTGAAAAA GGAAGTACGG CTAGTTTTAA CATTGAAGCC ATCGATCTCA ATAAAGATTT TATTCATATG AGTGTCTCAA GCGACAATTT ACTCTCGAAC TCCTTAGGTC AACCGCCAAC GGTGGGCGAA TTTCAGGTAA ACATTCCACC GGATTACTCA GATACGTCAA TCACATTATT GTTTACTGCT GATGACCTTC ATCAGCAGGT TTCGCAAGCC ATTACATTGA ATGTTTCACC GGTTAAATCT AGCACGGATA ACGTTCAAGC CACCTCAAGT GCCGCGGGAA GCGTGCACTA TGTTATGTTA TTTTCTATTC TTTTTATCAT ATTGCTACGC AGACATTTGG AATAA
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Protein sequence | MLRFFACLIL MTSFNIKAVD EQPKNIVIIL ADDLGWNDTT IFQPSQFLET PNINALAAKG MIFSQAYANS PLCSPTRATL LTGQTPARHG STAPSHHLPV VRLMPSLPAS AATNRKSIAP QTVTRLDTAL PTLSSIAKAN GYHTAHFGKW HLGAHPYSPS EHGFDIDIPN FQGAGPTGGY LAPWSFAPDI QPQIAGEHID IRLAKEAKKW IFSVKDDGPF FLNFWAFSVH APFNADADEI DYFINKRSGF HSQRNATYAA MVKQFDDAIG VLWQALVEAK VEKNTIIIFT SDNGGNMYTV VGNTHATSNF PLKGGKATEY EGGLKVPTAV IWPGLTQPNT LSNTPIQTAD FFPTLLNGVN LSWPSTHIVD GRDIRPVLQG GTLETRAIFT YYPAEPKVPD WLPPSATVTL DGWKLIRTFH YGKSGTHLYK LYNLNLDPSE STNLANTQIH KVSELDALLE AYLLESEAVI PIVNTGYRDG TFNYNTIGVE KESYQLPEEK IYSDIHFQIK TDQHVIDGGD TAKFVYQLSH HSNNASVAYK QFMGPAVTLA ADGNSISFVA PEVTQAEYVG LAFIVKDQDK TIRKQIGVRI NPTQVAPSLT ISQVTQSIEK GSTASFNIEA IDLNKDFIHM SVSSDNLLSN SLGQPPTVGE FQVNIPPDYS DTSITLLFTA DDLHQQVSQA ITLNVSPVKS STDNVQATSS AAGSVHYVML FSILFIILLR RHLE
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