| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2723 |
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| Symbol | |
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| ID | 4174483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3315264 |
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| End bp | 3316163 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055741 |
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| Product | lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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| Protein accession | YP_662289 |
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| Protein GI | 109899034 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1560] Lauroyl/myristoyl acyltransferase |
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| TIGRFAM ID | [TIGR02207] lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.333812 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAAAT CTCTTCTACA TCCAAGACAC TGGGCGAGCT GGTTTGCAGT ACTTATTCTT
AGGATCATTG CCTTACTTCC CTTTAAAGTA AAAATGTTAG CTGGCACTGC ATTTGGCAAA
ATTGGCTATC GATTTTTCAA ACATCGTCGT CATATCACCA CCACTAATAT TGCACTGTGT
TTTCCTGAAA AATCTGAAGC GGAACAAGAA CAACTGGTCA AAGATATTTT TGTGGCCAAT
GGCATTGGCT TTTTTGAAAT TGCATGGGCT TGGTGGGCTA AACCTGAGTC ATTACGTAAA
CGTTTTAGCG TACAAGGCTT AGAGGTATTA AAAGCTGCGA CGACCAACAA TCAAGGCGTA
TTGCTGATAG GCGGTCATTA TACCCATTTA GATTTAGCGG GAATGATGGT CAACTTAGTG
GCGGATATGG ACGTTATCTA TCGTAAAAAT AATGATCCAG TTTTTGAATA CGTGATCACC
GAAGGCAGAA AACGTGTCTT TAAAAACGTA TTTGAACGCT CTGATATGCG CGCCATCATT
CGCTCCCTGC GCGAGGGTCG CGTAGTCTGG TTCTCACCGG ATCAAGATCA CGGTATCAAG
AACTCTGTAT TCGCGCCGTT TTTTGGTATA CCCGCTACAA CTGTCACATC AGCCAGTAAA
TTAATGCGCT TAGGCAAGGC CAAACCGGTC TTCGTCGCCC ATAAACGCGA CCTTGAAACC
AATCAATATA AAATCACCTT TGCTATTCCA GAAGCTGAAT TTCCAAGTGG TGATGATGTG
CAAGACGCCA CCATTATCAA CCAAATGATT GAAAGCGCGA TCCGTGAGCA ACCTGATCAA
TACATGTGGG TACATCGCCG CTTTAAAACT CGCCCACCAG GGGTGCCTTC TGTGTATTGA
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| Protein sequence | MSKSLLHPRH WASWFAVLIL RIIALLPFKV KMLAGTAFGK IGYRFFKHRR HITTTNIALC
FPEKSEAEQE QLVKDIFVAN GIGFFEIAWA WWAKPESLRK RFSVQGLEVL KAATTNNQGV
LLIGGHYTHL DLAGMMVNLV ADMDVIYRKN NDPVFEYVIT EGRKRVFKNV FERSDMRAII
RSLREGRVVW FSPDQDHGIK NSVFAPFFGI PATTVTSASK LMRLGKAKPV FVAHKRDLET
NQYKITFAIP EAEFPSGDDV QDATIINQMI ESAIREQPDQ YMWVHRRFKT RPPGVPSVY
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