Gene Patl_2691 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2691 
Symbol 
ID4174451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3278058 
End bp3279065 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content49% 
IMG OID638055709 
ProductLacI family transcription regulator 
Protein accessionYP_662257 
Protein GI109899002 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATA TTAGGCAAGT GGCTAATTTA GCAGGTGTGT CGGTGGCAAC AGTCTCTAGG 
GCATTGCAGC AGCCGGAGCG CGTGTCACCA AAAACGCGTA ATAAAGTTAT GCTTGCCGTA
AACGAAGTGG GTTACAAACC GAATCTGATG GCGGTCAAGT TCCGCTCAGG TAAAACACAT
AGTTTGGTAG CACTGGTACC TACGGTAGCA AACGTCTTTT TTGCTCGCGT GATAAGTGGA
ATGCAGATAG CGGCCGCCCA GCGTGGTTAT ACCATTTTAC TTGCTAACAC ACTGGGCGAT
GAAACCATAG AGGCAAACTA CGCAAAAATG GTGCAAACCT CTCAGGCTGA TGGGCTCATT
CAATTAAGAG CGCATAATCC CTTTGATGCA TCGATCAACA AGCCCAACGA ATTACTGCCC
ATGGTCAACG CGTGCGAGGT CATGCACGAC ATTAACTGCC CTGTTGTTAC GTTAGATAAC
CGCGCAGCGG CTAAAGCCAT GACGATGCAT TTAATTGAGC AAGGTCATAA ACGTATCGCA
CTCATCAAAG GCCCTCAATC AAGCCCACTG ACGCGCGAGC GCTTGGCAGG TTATGGCGAT
GCGCTAACCG AGGCAGGTTT GAAATTTGAT GATTCCCTGC TCTATCCAGG TGACTTTACC
TTGCAATCCG GACATGACGC AGCCACTAAA ATCATTGCCA GTGAGCACCG CCCAAGTGCG
GTATTTTGTG AAAATGACGA AACCGCCATT GGGGCAATGC AGTGTTTTAA ACAAGCGGGA
CTGCGAATTC CCCAAGATAT TTCCATTGCG GGGTTTGATG ATATTTCATT TTCTGCATTT
TGCGATCCCC CGCTGACCAC TATCGCTCAG CCAGCAGAAG AGTTTGGCCA AAGTGCGGTG
TCATTATTGA TTGATTTACT CGAAGGCAAG ATCACCAAAG CGCCAAAAGT CATCATGCCA
TTTGAATTAA TTGTGCGCGC TAGTACGGGC CCAGCGCCGA CGCTTTAG
 
Protein sequence
MSNIRQVANL AGVSVATVSR ALQQPERVSP KTRNKVMLAV NEVGYKPNLM AVKFRSGKTH 
SLVALVPTVA NVFFARVISG MQIAAAQRGY TILLANTLGD ETIEANYAKM VQTSQADGLI
QLRAHNPFDA SINKPNELLP MVNACEVMHD INCPVVTLDN RAAAKAMTMH LIEQGHKRIA
LIKGPQSSPL TRERLAGYGD ALTEAGLKFD DSLLYPGDFT LQSGHDAATK IIASEHRPSA
VFCENDETAI GAMQCFKQAG LRIPQDISIA GFDDISFSAF CDPPLTTIAQ PAEEFGQSAV
SLLIDLLEGK ITKAPKVIMP FELIVRASTG PAPTL