| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2657 |
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| Symbol | |
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| ID | 4174417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3222537 |
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| End bp | 3223808 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055676 |
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| Product | endo-1,4-beta-xylanase |
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| Protein accession | YP_662224 |
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| Protein GI | 109898969 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.650838 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAGAA AGTTCATGCT AAGAGGGCGT TTGAGGAAAG AATTGATACT CAAGTTAAAC
CTGCTTAAAC CCAACATGCT AACGATGAAA CCTTGCTTGT TGGCACTCGC GTTAGCGGCG
ACATCCACTG TAAGCCAGGT AGCTACAGCC GTGAGCTCAA ATGACTCAGC CTTGAGCCTT
AAAAATGAGG CAGTGAATCC TAAAAACGAG GCTGTGAGCC AAACAAAAAG TCTGAAAGCC
CATTTCAGTA AACAGTTTTT AGTGGGCAGT GCTATTAACG CACAGCAAGC TAAACGCACC
GAACAAGACA CTGATGCCTT AATCATCACC CAATTTAATA CGATTACCCC TGAAAACGAA
TTAAAGTGGG AGCGCATTCA TCCAAAGCCT GATGCCTATG ACTTCTCTCT GTCCGATGAG
TACGTGGATT TCGGCTTAGC CAATAATATG TTCATTATAG GGCACACGTT GGTTTGGCAC
AGCCAAACAC CGGATTGGGT ATTTGAAGAC GTACAAGGTG AGTTGTTAAC GAGAGAGGCG
TTGTTAGCTC GCATGAAAGA GCACATTCAC ACCGTTGTGA GTCGCTACAA AGGCAAAATC
AAAGGCTGGG ACGTGGTCAA TGAAGCGCTC AATGAAGATG GTAGCCTGCG GGATTCTAAG
TGGCGGCAGA TTATTGGCGA TGACTTCATT GAAAAAGCCT TTACCTATGC CCACGCTGCA
GATCCAGATG CTAAATTGTA TTACAACGAT TACAACTTAT ATAAACCAGA AAAAAGTGCC
GGTGCAGCAA AACTAATCAA GTCATTACAA GACAAAGGGA TCCCTGTTCA CGGTGTCGGC
TTGCAAGGCC ACTACTCGTT AACGCACCCT GCCTTAAATG AATTAGACGA TGCGTTAACG
CTGTTTGCTT CCTTGGGGAT TGAATCCATG ATCACCGAGT TAGATGTATC CGTATTACCC
TTTCCCAGTG AAGCTGAACA AGGGGCAGAT ATCAGCCAAG ATTTATCCTT GAACAAAGCC
TTAAATCCCT ATCCTGATGG GTTACCAGAA GCGCAGCAGG ACGCATTAAG TGCTCGATAC
AAGGAGATAT TTTCGGTATT TCTAACGCAC CAAGACACGC TAACACGCGT TACGTTTTGG
GGCGTGAATG ATGCCCACAG TTGGCGTAAC AACTGGCCAA TGCGCGGGCG CACCGATTAC
CCATTACTGT TTGATCGAAA CAGTGAAATT AAGCCCGCCT ATCGTGCTGT CATGACACTA
ACTATTGACT GA
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| Protein sequence | MLRKFMLRGR LRKELILKLN LLKPNMLTMK PCLLALALAA TSTVSQVATA VSSNDSALSL
KNEAVNPKNE AVSQTKSLKA HFSKQFLVGS AINAQQAKRT EQDTDALIIT QFNTITPENE
LKWERIHPKP DAYDFSLSDE YVDFGLANNM FIIGHTLVWH SQTPDWVFED VQGELLTREA
LLARMKEHIH TVVSRYKGKI KGWDVVNEAL NEDGSLRDSK WRQIIGDDFI EKAFTYAHAA
DPDAKLYYND YNLYKPEKSA GAAKLIKSLQ DKGIPVHGVG LQGHYSLTHP ALNELDDALT
LFASLGIESM ITELDVSVLP FPSEAEQGAD ISQDLSLNKA LNPYPDGLPE AQQDALSARY
KEIFSVFLTH QDTLTRVTFW GVNDAHSWRN NWPMRGRTDY PLLFDRNSEI KPAYRAVMTL
TID
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