Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2617 |
Symbol | |
ID | 4174377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3180605 |
End bp | 3181474 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 638055638 |
Product | hypothetical protein |
Protein accession | YP_662186 |
Protein GI | 109898931 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATCA ATCGTGTACT TCTAACGGCT GTGGGCAGTG TGTTACTCGC TATGGTGACT ATTCAGTCTG GTGCGTCTTT AGCCAAGCAG CTTTTCCCTA TCGTTGGCCC AGAAGGCACC ACGGCACTGC GTTTGGGATT TGCTGCTGCG GTACTTTGGT TAGTATTTCG TCCATGGCGA GCACTCCCTC AGGGGCGAGA TTGGCGCAGC ATTATTGTTT ACGGCCTGTG CTTAGGCGGT ATGAATATTC TGTTCTACTT GGCGATTGAA CGTATTCCCT TAGGCATTGC AGTTGCCCTT GAATTCACCG GCCCGCTGGC TGTGGCTTTG TTTTCATCTA AACGAAAAAG TGACCTATTG TGGGTGGCTT GCGCCATAGC GGGGATCGTA CTGCTAATGC CTGATTTATC CAGCGCACAG GGCCTCGACC TTACCGGCGC GCTAATGGCA CTAGGTGCTG GTGCATGCTG GGCAGGTTAT ATTTTATTTG GCACCCGTAC AGGGAAACAA GCGTCTGGTG GCATCACTGT CGCTTTAGGC ATGACGGTGG CAGCCATTGT GCTGGTCCCC GTTGGCGCGG TGACCCAAGG CTTAGCCTTA TTTAGCTGGG AAGTACTGCC TCTAGGATTA TTGGTGGGAG TGTTATCTAG CGCTCTACCC TACTCTTTGG AAATGGTCGC TCTTAGAAAT ATGCCGACAC AAGCGTTTAG CGTACTCATG AGTTTAGAGC CCGCCATCGC GGCCTTGGCG GGCTTGGCTA TTTTGGGCGA GCACTTGAGC CTGTTGCAAT GGGCTGCTAT TGCCTTGGTG ATTGTCGCGT CGATCGGCAG CAGCTTTACC CCTAAAAAAG CGGTCAATAT GGGCGTGTAG
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Protein sequence | MQINRVLLTA VGSVLLAMVT IQSGASLAKQ LFPIVGPEGT TALRLGFAAA VLWLVFRPWR ALPQGRDWRS IIVYGLCLGG MNILFYLAIE RIPLGIAVAL EFTGPLAVAL FSSKRKSDLL WVACAIAGIV LLMPDLSSAQ GLDLTGALMA LGAGACWAGY ILFGTRTGKQ ASGGITVALG MTVAAIVLVP VGAVTQGLAL FSWEVLPLGL LVGVLSSALP YSLEMVALRN MPTQAFSVLM SLEPAIAALA GLAILGEHLS LLQWAAIALV IVASIGSSFT PKKAVNMGV
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