Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2608 |
Symbol | |
ID | 4174368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3171554 |
End bp | 3172345 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 638055629 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_662177 |
Protein GI | 109898922 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTAGTG CAATGGATGC CAATAAAGCC CCGCTGCTAA CACACCTTAT CGAACTTAGA CGTCGCTTAC TGTACTGCTT TGGATTTTTT GCTCTGATGT TTGGTGTATC GTATTTTTTT GCTGAGCAAA TATACCAATT TCTACAACAA CCTTTACTGC AGATCTTTGG CCCCGACAGC GGTCGGCGAA TGATTTACAC CGGCTTGCAC GAAGCGTTTT TTACATACCT TAAACTGGCA TTTTTTAGCG CAACGTTTTG CACCTTGCCC ATCACCCTAA TTCAAGTTTG GAAGTTTATT GCCCCCGGTA TGTATCAACA GGAGCAAAAA GCCCTTTCAC CGCTTTTTAT TGCCACGCCC ATTCTATTTA TAGGCGGCGC GGCACTGGCT TTTTATTTGG TCATGCCATT AGCGTGGGAG TTTTTTATTA GTTTTGAATC ACTAGGCCAA GAGGATGGGA TCAGCGTCGA GCTGGAAGCA AAAATGAGCG AGTACTTAGC CCTAGTGATC CGATTGATCC TCGCCTTTGG CTTATGTTTC GAATTGCCTG TGTTGTTGTT GGTGCTCGCC AAAGCGGGGG TGGTGGACGC CGACATGCTT AAAACGTATC GCAAACATGC CATAGTATTA GTTTTCTTTA TCGCCGCTTT GATTACTCCA CCAGATTTGA TTTCTCAAAT TGTATTAGGA GTGCCAATTT TACTGTTATA CGAGCTGTCA ATTGTATTGA TAAAGCGCAG TGAGTCAGAC AAAAAACACT TACAGCAAAA ACAAATGGGC CCGTCGATTT AA
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Protein sequence | MSSAMDANKA PLLTHLIELR RRLLYCFGFF ALMFGVSYFF AEQIYQFLQQ PLLQIFGPDS GRRMIYTGLH EAFFTYLKLA FFSATFCTLP ITLIQVWKFI APGMYQQEQK ALSPLFIATP ILFIGGAALA FYLVMPLAWE FFISFESLGQ EDGISVELEA KMSEYLALVI RLILAFGLCF ELPVLLLVLA KAGVVDADML KTYRKHAIVL VFFIAALITP PDLISQIVLG VPILLLYELS IVLIKRSESD KKHLQQKQMG PSI
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