| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2572 |
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| Symbol | |
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| ID | 4174328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3117012 |
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| End bp | 3118256 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 638055590 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_662142 |
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| Protein GI | 109898887 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCTTTT GGCCTTTCAT GCTGCTTTAT TGCTTTTTGA ATATGGCCGC CCCTCATGCC
AAAACGAATG AGACCCTAAA CATTAGCTTA TTAGTGGCCA GCAAAGGACA GCGAGCGGCA
TACCATCAAT TAGCAGAAGC ATTTGAACAG CAGCATCAAA ATCTACGGAT TGTGTTTACG
GTGCAAAACG ACAAACAGTA CAAAGCATCG ATAGAGAAGT GGCTAACCCA AAAAAATGGA
TTTGATGTCG TATATTGGCA AGCGGGAGAA CGTATGAATC AGTTTGCCTC CCAAGGTCTA
TTAGAGCCGT TGGACGATTT GTGGCAGAAG AATAACTGGC TCACGCACTT TCCTCAAAGG
ATAACGAGAA CAGTGCAACA AGGTGATAGT TTATATGCAG CGCCTTTCGC TTTTTACCAA
TGGAGTATCT ATTACAAAAA ATCACTCTTT TCCCGTCTAG CGATAGAGCC GCCTAAAACT
TGGAGTGAAT TTCTGGTTGT TTGCGCAGCC CTAAAATCAA ATGGCGTTAC GCCTGTCGTG
GTCGGTGGGA AAGAAAAATG GCCTGTGGCG GCATGGTTTG ACTACCTGAA CTTACGTATC
AACGGCCTCG CCTTTCATCA ACAATTAATG GCTGGAAAAA TAGACTACAC CGAGCCAAGG
GTAAAATCGG TTTTTAGCGC TTTGAAGCAA CTTATCGATT TAGGTTATTT TTTATCGGGT
AGCCAAGCAA AAAATTGGCA GGATGCTATG CCCTATGTAT ATAGAGATCT GGCAGGTATG
ACGTTATTAG GCAGTTTTGT GGAGCAACAG TTTGTTGAGC AATTTCGTGA CGATATCGGT
TTTTTCCGTT TTCCACAAAT AGACAGTAAA TTACCGTTAT TCGAAGAAAC ACCCATTGAG
GTGTTTATGA TCCCTAAAAA TGCGCAAAAC AAACCGGCTG CACGATTGTT CATGTCCTTT
ATTGGCCGTG CAGATATCCA AGAAACGCTC AGTAAAAATT TGGGCTATCT GTCCCCGCAT
CTGCAAGCAA CACGGACCCA CAATTACCAT TCAAACCAGG AGCCTTACAT ATTCGCTGAT
AACCAGGATA TCACCCAATT CTACGACCGT GACACCACGA AAAATATGTC TGTCGATGGT
ATGCAGCTCA TGTCAGATTT TATTGATAAC CCAGATGTTT CCCTGATCAC GCGCAAACTG
GAACAGGTTC GCTTAAGATC CTTTCCGCAA TCTGATATAA AATAG
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| Protein sequence | MRFWPFMLLY CFLNMAAPHA KTNETLNISL LVASKGQRAA YHQLAEAFEQ QHQNLRIVFT
VQNDKQYKAS IEKWLTQKNG FDVVYWQAGE RMNQFASQGL LEPLDDLWQK NNWLTHFPQR
ITRTVQQGDS LYAAPFAFYQ WSIYYKKSLF SRLAIEPPKT WSEFLVVCAA LKSNGVTPVV
VGGKEKWPVA AWFDYLNLRI NGLAFHQQLM AGKIDYTEPR VKSVFSALKQ LIDLGYFLSG
SQAKNWQDAM PYVYRDLAGM TLLGSFVEQQ FVEQFRDDIG FFRFPQIDSK LPLFEETPIE
VFMIPKNAQN KPAARLFMSF IGRADIQETL SKNLGYLSPH LQATRTHNYH SNQEPYIFAD
NQDITQFYDR DTTKNMSVDG MQLMSDFIDN PDVSLITRKL EQVRLRSFPQ SDIK
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