| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2565 |
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| Symbol | |
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| ID | 4174320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | + |
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| Start bp | 3110284 |
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| End bp | 3110940 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638055582 |
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| Product | outer membrane lipoprotein LolB |
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| Protein accession | YP_662135 |
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| Protein GI | 109898880 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
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| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTATGTTC CTATAGCCTC CTTTCATTTT CTAAGTATGG TGCCTGTGAG CGTGCGTTCA
ACAATACATT TCGCATTACT TATTCTTATT ACGATTTTAC TCAACGCGTG TGCGACGCCT
CCACCCCAAA ATATTCAGGT TAATAGTCAA GAACATCAAG CTAAGTTAAG TCAGATACAG
CATTGGAAAT TAAAAGGTCG TATGGCCTTT AAAGGTAGCG ATGAAAAGTT CAGCGCGAAT
GTAAATTGGC AACAAATCGA CGATAGCTAC CATCTTTCTC TCAATACTAT GTTGGGCATT
AATATTCTGA CTATGCAGGG AGACAAAGAG TCTGCTGAGC TCAGTACAGA CGATGAGCAG
TATCAAGATA CGGATGCCAG CCATTTAATA TGGCGAATTA CCGGGTGGCA AATCCCGGTG
TCGCAATTTC CATTTTGGAT TAAAGGCCAA GCTCAGCCCA TTGACAAGGT CATTTATGCG
CAAAGTGGCG TAATCGAGCA GCTAATCCCT GTTTGTGACA GCTGTGCGGG TTGGCTGATC
ACTTACCAAG ACTACCACCA AGTGGATGAT GTTTGGCTGC CTCACAATAT AAAGCTCAAC
AATTCCGCTC TTGGGAATCA AATTTTAATC AGAGTAAATC AATGGACCAA ACAATAG
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| Protein sequence | MYVPIASFHF LSMVPVSVRS TIHFALLILI TILLNACATP PPQNIQVNSQ EHQAKLSQIQ
HWKLKGRMAF KGSDEKFSAN VNWQQIDDSY HLSLNTMLGI NILTMQGDKE SAELSTDDEQ
YQDTDASHLI WRITGWQIPV SQFPFWIKGQ AQPIDKVIYA QSGVIEQLIP VCDSCAGWLI
TYQDYHQVDD VWLPHNIKLN NSALGNQILI RVNQWTKQ
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