| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2554 |
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| Symbol | |
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| ID | 4174309 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3097836 |
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| End bp | 3098699 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638055571 |
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| Product | dethiobiotin synthase |
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| Protein accession | YP_662124 |
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| Protein GI | 109898869 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0132] Dethiobiotin synthetase |
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| TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0309873 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGCTAG ACTCACCCAG CACTAATCAA CGCCACCTTA AAAGTCATCA GCAAAGCATC
AGCAAAAATG CCTTACAACA AGGCTCTTCA GAGTATACGC CTGCGGAGCA AACGCCCTCA
GATCAAAGGC CCTTAAAAGA AAGTAAGCAA CATGCTTTTT TCGTGACAGG CACTGACACT
GAAGTGGGCA AAACCTTTGT TAGCTGTGCG TTACTAGCAG CGTGTCATGA CGCTGGCTTA
TCAACAGCGG CATATAAACC CGTATCCGCT GGTTGCGACG TGACCCAGGC GGGCCTTAGA
AATGAAGATG CACTGGCGTT ACAACAAGCC AGTAATACCC CACTTAGCTA CGATGAAGTA
AACCCAATTG CGTTTGCAGA GCCTATCGCG CCGCATTTAG CCTGCGAAAA GTTAATGACT
AAAGGCCAGG GGGCTCCCAT TGAGTTAGAT ACCATAAACG AAGGCTACGT AGCCTTAATA
GAGAAAAAAA GCGATATGCT TTTGGTAGAA GGCGCGGGCG GTTGGCGTTT ACCCCTTGGT
CAAAATAGTC AGGGCCAAGA ACAGTTTTTA TCTGACTTTG CCATTAGCCA AAAACTGCCA
GTGATCTTAG TTGTTGGTAT GCGGTTAGGC TGTATTAATC ACGCGTTGTT AACAGCACAA
TCAATAGAGC AGGACGGTCT TAATGTTGCT GGTTGGGTCG CTAATATGCT TGAGCCAGAA
ATGCCATTTT TGGAAGAGAA CATCCACAGT CTGGCGCGTT TACTTAATGC ACCCTTGATC
GCGCGAGTGC CACGCGCAGA AAGCCCCATA GCCGTGAAAG CACGCATTAA TTTATCATTG
CTGGGGGTAA AAAAGCCTGA CTGA
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| Protein sequence | MSLDSPSTNQ RHLKSHQQSI SKNALQQGSS EYTPAEQTPS DQRPLKESKQ HAFFVTGTDT
EVGKTFVSCA LLAACHDAGL STAAYKPVSA GCDVTQAGLR NEDALALQQA SNTPLSYDEV
NPIAFAEPIA PHLACEKLMT KGQGAPIELD TINEGYVALI EKKSDMLLVE GAGGWRLPLG
QNSQGQEQFL SDFAISQKLP VILVVGMRLG CINHALLTAQ SIEQDGLNVA GWVANMLEPE
MPFLEENIHS LARLLNAPLI ARVPRAESPI AVKARINLSL LGVKKPD
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