Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2554 |
Symbol | |
ID | 4174309 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3097836 |
End bp | 3098699 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638055571 |
Product | dethiobiotin synthase |
Protein accession | YP_662124 |
Protein GI | 109898869 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0309873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGCTAG ACTCACCCAG CACTAATCAA CGCCACCTTA AAAGTCATCA GCAAAGCATC AGCAAAAATG CCTTACAACA AGGCTCTTCA GAGTATACGC CTGCGGAGCA AACGCCCTCA GATCAAAGGC CCTTAAAAGA AAGTAAGCAA CATGCTTTTT TCGTGACAGG CACTGACACT GAAGTGGGCA AAACCTTTGT TAGCTGTGCG TTACTAGCAG CGTGTCATGA CGCTGGCTTA TCAACAGCGG CATATAAACC CGTATCCGCT GGTTGCGACG TGACCCAGGC GGGCCTTAGA AATGAAGATG CACTGGCGTT ACAACAAGCC AGTAATACCC CACTTAGCTA CGATGAAGTA AACCCAATTG CGTTTGCAGA GCCTATCGCG CCGCATTTAG CCTGCGAAAA GTTAATGACT AAAGGCCAGG GGGCTCCCAT TGAGTTAGAT ACCATAAACG AAGGCTACGT AGCCTTAATA GAGAAAAAAA GCGATATGCT TTTGGTAGAA GGCGCGGGCG GTTGGCGTTT ACCCCTTGGT CAAAATAGTC AGGGCCAAGA ACAGTTTTTA TCTGACTTTG CCATTAGCCA AAAACTGCCA GTGATCTTAG TTGTTGGTAT GCGGTTAGGC TGTATTAATC ACGCGTTGTT AACAGCACAA TCAATAGAGC AGGACGGTCT TAATGTTGCT GGTTGGGTCG CTAATATGCT TGAGCCAGAA ATGCCATTTT TGGAAGAGAA CATCCACAGT CTGGCGCGTT TACTTAATGC ACCCTTGATC GCGCGAGTGC CACGCGCAGA AAGCCCCATA GCCGTGAAAG CACGCATTAA TTTATCATTG CTGGGGGTAA AAAAGCCTGA CTGA
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Protein sequence | MSLDSPSTNQ RHLKSHQQSI SKNALQQGSS EYTPAEQTPS DQRPLKESKQ HAFFVTGTDT EVGKTFVSCA LLAACHDAGL STAAYKPVSA GCDVTQAGLR NEDALALQQA SNTPLSYDEV NPIAFAEPIA PHLACEKLMT KGQGAPIELD TINEGYVALI EKKSDMLLVE GAGGWRLPLG QNSQGQEQFL SDFAISQKLP VILVVGMRLG CINHALLTAQ SIEQDGLNVA GWVANMLEPE MPFLEENIHS LARLLNAPLI ARVPRAESPI AVKARINLSL LGVKKPD
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