Gene Patl_2536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2536 
Symbol 
ID4174291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3075604 
End bp3076374 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content47% 
IMG OID638055553 
ProductUBA/THIF-type NAD/FAD binding fold 
Protein accessionYP_662106 
Protein GI109898851 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.424886 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTCTA TTACGCCCCC GACACTAACC AAAGCGCTCG CCTTGCGTTA CGCGAGGCAA 
ATTTTATTGC CAGCTATCGA CCTTGATGGC CAAGAAGCCC TCATGGGTTC CAAGGTATTG
ATTATTGGTG TAGGCGGTTT AGGCTGCGCT GCTGCGCAAT ACCTTGTTAG TTCTGGTATT
GGCGAAATCA CCTTGGTGGA TGATGACAAG GTTGAGCTGT CTAATTTACA TCGCCAAGTT
CTTCATCATG AACAAGACGT GGGCGTTAAA AAAGTCGATT CAGCGAAGAC GAGTTTACTG
GCCAATAATA GCCTGTGCGT TATCAACACC ATTGATGAGC GCCTTGATGA TAATGCGCTT
AGCCAACACG TCAGCCAACA TAATGTGGTG CTCGATTGCA CTGACAATTT AGCCACTCGC
CAGCAAATTA ATAAACTGTG TTTCACTCAT AAGGTGCCCC TTATAAGCGG CGCTGCAATT
CGCTTTGAAG GTCAAGTGAG CACCTACCTG ATGGATAACC ACAGCCCTTG TTACCAGTGC
TTAAGTCAGG TTTTTCCAGA GCAGCAGCTC AGCTGCATGG AAGCTGGCGT GATACCTCCG
TTAGTAGGCG TTATAGGCAG CATGCAGGCA TTAGAGGCGA TTAAATATCT CACAGGTGCT
GGCGAACTTC TCAATGGTAT TTTGCAACTG TTCGATGCTA AATCTTCGCA GTTTCAACGC
TTTTCTATCC CTAAAAACCC GCAATGTAGC ATTTGTTCTA AAACGGGCTA A
 
Protein sequence
MPSITPPTLT KALALRYARQ ILLPAIDLDG QEALMGSKVL IIGVGGLGCA AAQYLVSSGI 
GEITLVDDDK VELSNLHRQV LHHEQDVGVK KVDSAKTSLL ANNSLCVINT IDERLDDNAL
SQHVSQHNVV LDCTDNLATR QQINKLCFTH KVPLISGAAI RFEGQVSTYL MDNHSPCYQC
LSQVFPEQQL SCMEAGVIPP LVGVIGSMQA LEAIKYLTGA GELLNGILQL FDAKSSQFQR
FSIPKNPQCS ICSKTG