Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2534 |
Symbol | |
ID | 4174289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3071525 |
End bp | 3074110 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638055551 |
Product | nitrite reductase (NAD(P)H), large subunit |
Protein accession | YP_662104 |
Protein GI | 109898849 |
COG category | [C] Energy production and conversion |
COG ID | [COG1251] NAD(P)H-nitrite reductase |
TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCAGCAA ATACAGTCAA TATAGTCGTG GTAGGAAACG GAATGGTGGG CCACCATTTT GTTGAGCAAA TCACTAACCA CGGCAAAACC GACCCTTCTA TTACTTATAA AGTCACTGTG TTATCAGCTG AGCCAAGACT CGCTTACGAC CGAGTGCATT TGTCGGAATA TTTCTCAGGC AAGACAGCGG ACGATCTCGC GTTAACCACG CCAGCACACT ATGAAGCATT AGGTGTTGAT TTTCACCTTG ATGCCGCAGT GGTCGATATT GACAAGCTAG GTAAGTTTGT TAAAACCAAA TCCGGTCAGG TTTTCGCTTA CGACAAACTC ATCATGGCCA CTGGCTCTTA TCCGTTTGTG CCACCAATTG AGGGGAACGA TCAACCTCAT TGCTTGGTGT ACCGCACCAT TGAAGATTTA GAGGATATCA GCGCTTCAGC TAAAGTGAGC AAAACCGGTG TGGTTGTGGG GGGCGGCTTA TTGGGTTTAG AAGCGGCGAA CGCATTGCGA GAGGCTGGTC TTGAAACTCA CGTTGTGGAG TTTGCTCCGC AATTAATGGC GGTTCAAGTC GACACAGGCG GCGGTCGTCT ATTAAAAGAC AAGATTGAAG CCTTAGGCGT GCAAGTTCAC ACCCAAAAAG CCACACAGCG TATTGAGGCG GGTCAAACAA GTCGTTATCG CATGTGTTTT GCCGATGGGG ATTTTTTAGA GACCGACATG ATCCTGTTCT CAGCAGGTAT TCGGCCACAG GATACGCTAG CACGCCAATA TGAGATTAAA ATCGGCGAAC GCGGCGGTAT TGTGGTTGAT AACCACTGTT TAACGTCCGA GCCAGATATT TATGCTATTG GCGAATGTGC CTTATGGAAT AACTTTATTT TTGGCTTAGT TGCCCCAGGC TACACCATGG CGCGCGCTGC AGCGAGTCAC ATCACGGGTG GCGATGTAGA ATTTTTAGGC GCAGATATGA GCACCAAGCT CAAACTCATG GGCGTTGAAG TGGGCTCTAT TGGTGATGCA CATGCTCGCA TACCTGGTGC GCAAACCTAC ATTTATGAAA ATCAGCCTGA TGGCGTGTAT AAAAAAATGG TGGTTAACCA TGAGCAAAGT GTGCTGCTTG GCGCCGTTTT GGTCGGAGAC ACCAGTGACT ACGACACGCT TCTACAATAT GCGTTAAATG GCATCGATTT ACCTGAACAC CCTGAAAGCT TGATTTTGCC TGCCTCAGGT GATGCGCCAG CAGGTGGCTT AGGCGCAGAC GCGCTGCCTG AAACGGCGAC CATTTGCTCA TGTCACAACG TATCAAAAGG CGACATTATT GCTGCTTTTG ATGGCGGAGC CTGCGATTTA GCCAGTGTTA AATCATGCAC TAAAGCCAGC ACTGGTTGCG GTGGGTGTTC GGCGTTACTG AAAACCGTGG TCGACAGTGA ATTGGGCAAA CGCGGCGTGG AAGTGAAAAA AGACATCTGT GAGCATTTTG CTTATTCGCG CCAAGAGCTT TATCACATGG TTAAAGTCGG CAAAATTCAA AGCTTTGACG AGTTGATTGA AAAACACGGT CACGGTTTAG GCTGTGAAAT TTGTAAGCCT GCTGTGGGCT CAATTATGGC CTCGGTGTGG AATGACTTCG TGTTAGAAAA GCCTCACGTA GCCTTACAAG ACACCAATGA TACTTATTTA GGCAATATGC AGAAAAACGG GACCTACTCG GTCGTGCCAC GTATTGCCGG CGGTGAAATT ACCCCAGACA AACTGATTGT ATTGGGTCAA GTTGCGAAAA AATACAACTT GTATACCAAG GTCACAGGTG GCCAACGTAT CGATTTGTTC GGCGCGCGAG TCGAACAACT TCCGCCTATT TGGGAAGCCC TTATTGCTGC CGGTTTTGAA ACCGGTCATG CCTATGCGAA ATCACTGCGT ACCGTTAAGT CTTGTGTAGG CAGTACTTGG TGTCGTTTCG GTGTGCAAGA TTCTGTGGGT CAGGCTATCG ATCTGGAGAA CCGTTATAAA GGTCTACGTG CGCCGCACAA AATAAAATTT GGTGTGTCAG GTTGCACCCG CGAGTGCGCA GAAGCACAGA GTAAAGACAT AGGGGTTATT GCTACTGAAA ACGGCTGGAA CCTATATGTA TGTGGTAACG GCGGCATGAA ACCTCGCCAT GCGGATTTGT TTGCTACTGA TTTAGATGAC GCCACCTTAG TTAAATATAT TGACCGCGTG TTGATGTTTT ACGTGGCAAC TGCGGATCGT TTACAGCGCA CCTCAGTATG GTTAGAGAAT CTAGAAGGCG GGTTAGCGTA TTTGCAAGAT GTGGTGATCA ACGACTCCCT AGGCTTAGGC GAAGAGCTCG AGCAACAAAT GCAACACATC AAAGATACTT ACCAATGTGA GTGGAAAACA GCCATTGAAG ATGAGTCTTC ACGTAAACGT TTTCGTCAAT TCGTCAACAG CGAACAGAGC GATAAAAATG TCGTGTTTGT ACAAGAGCGC GCGCAAATTC GACCCGCTAC GGAAGCGGAA CTAGAGACCC TTGCTAAATC CGGCAAAGGT ACCGAGCAAA TTATCGATGT TGTTGAGTTG GCGTAA
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Protein sequence | MSANTVNIVV VGNGMVGHHF VEQITNHGKT DPSITYKVTV LSAEPRLAYD RVHLSEYFSG KTADDLALTT PAHYEALGVD FHLDAAVVDI DKLGKFVKTK SGQVFAYDKL IMATGSYPFV PPIEGNDQPH CLVYRTIEDL EDISASAKVS KTGVVVGGGL LGLEAANALR EAGLETHVVE FAPQLMAVQV DTGGGRLLKD KIEALGVQVH TQKATQRIEA GQTSRYRMCF ADGDFLETDM ILFSAGIRPQ DTLARQYEIK IGERGGIVVD NHCLTSEPDI YAIGECALWN NFIFGLVAPG YTMARAAASH ITGGDVEFLG ADMSTKLKLM GVEVGSIGDA HARIPGAQTY IYENQPDGVY KKMVVNHEQS VLLGAVLVGD TSDYDTLLQY ALNGIDLPEH PESLILPASG DAPAGGLGAD ALPETATICS CHNVSKGDII AAFDGGACDL ASVKSCTKAS TGCGGCSALL KTVVDSELGK RGVEVKKDIC EHFAYSRQEL YHMVKVGKIQ SFDELIEKHG HGLGCEICKP AVGSIMASVW NDFVLEKPHV ALQDTNDTYL GNMQKNGTYS VVPRIAGGEI TPDKLIVLGQ VAKKYNLYTK VTGGQRIDLF GARVEQLPPI WEALIAAGFE TGHAYAKSLR TVKSCVGSTW CRFGVQDSVG QAIDLENRYK GLRAPHKIKF GVSGCTRECA EAQSKDIGVI ATENGWNLYV CGNGGMKPRH ADLFATDLDD ATLVKYIDRV LMFYVATADR LQRTSVWLEN LEGGLAYLQD VVINDSLGLG EELEQQMQHI KDTYQCEWKT AIEDESSRKR FRQFVNSEQS DKNVVFVQER AQIRPATEAE LETLAKSGKG TEQIIDVVEL A
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