Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2527 |
Symbol | |
ID | 4174282 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | - |
Start bp | 3063055 |
End bp | 3063663 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 638055544 |
Product | (Acyl-carrier protein) phosphodiesterase |
Protein accession | YP_662097 |
Protein GI | 109898842 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1182] Acyl carrier protein phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.330899 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACG TATTAGTGCT AAATGCCAGT TTACAAGGTG AGAACGGCAA CTCAAGTCAA TTGACGAGTG AGTTTGTGAC ACAACTACAG CAAACTGAAA GTATCAAGGT GGAAAAGGTT GATTTAAACA CCTTGAATCT GCCGCATTTA AGCGCTCAAG AGATGCAAAC GTGGAGCATG CTCAGCGACA ATATGACCAA TGATCAAGCC GCTCTTGCTG CTTATTCAAA CGAGTTATTG GCACAGTTAG AGCGCAGCGA CGTCATAGTG GTGGGCATGC CCATGTACAA CTTTACTATT CCGTCTACGT TTAAAGCGTG GATTGACCGA GTCGCAAGAG CAGGGCGTAC GTTTAGTTAC ACCTCAGAAG GCCCTAAAGG GCATCTACAA GGCAAAACAG TGTATATCTT CGCTGCGCGG GGCGGTATTT ATCAAGGTAC TGATAACGAT ACGCAGACGC CTTACTTAAA ACTGGTCTTT GGTCTTATGG GGATAACAGA TGTGAACTTT ATTTATCTTG AAGGACTGAA TATGGGAGAA GAGTATGCCC AAACATCATG GCAACAAGCC CGAGAAAGTC TGACAACGCT GCTACCTGCA ACCGTTTAA
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Protein sequence | MKNVLVLNAS LQGENGNSSQ LTSEFVTQLQ QTESIKVEKV DLNTLNLPHL SAQEMQTWSM LSDNMTNDQA ALAAYSNELL AQLERSDVIV VGMPMYNFTI PSTFKAWIDR VARAGRTFSY TSEGPKGHLQ GKTVYIFAAR GGIYQGTDND TQTPYLKLVF GLMGITDVNF IYLEGLNMGE EYAQTSWQQA RESLTTLLPA TV
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