Gene Patl_2527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2527 
Symbol 
ID4174282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3063055 
End bp3063663 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content45% 
IMG OID638055544 
Product(Acyl-carrier protein) phosphodiesterase 
Protein accessionYP_662097 
Protein GI109898842 
COG category[I] Lipid transport and metabolism 
COG ID[COG1182] Acyl carrier protein phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.330899 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAACG TATTAGTGCT AAATGCCAGT TTACAAGGTG AGAACGGCAA CTCAAGTCAA 
TTGACGAGTG AGTTTGTGAC ACAACTACAG CAAACTGAAA GTATCAAGGT GGAAAAGGTT
GATTTAAACA CCTTGAATCT GCCGCATTTA AGCGCTCAAG AGATGCAAAC GTGGAGCATG
CTCAGCGACA ATATGACCAA TGATCAAGCC GCTCTTGCTG CTTATTCAAA CGAGTTATTG
GCACAGTTAG AGCGCAGCGA CGTCATAGTG GTGGGCATGC CCATGTACAA CTTTACTATT
CCGTCTACGT TTAAAGCGTG GATTGACCGA GTCGCAAGAG CAGGGCGTAC GTTTAGTTAC
ACCTCAGAAG GCCCTAAAGG GCATCTACAA GGCAAAACAG TGTATATCTT CGCTGCGCGG
GGCGGTATTT ATCAAGGTAC TGATAACGAT ACGCAGACGC CTTACTTAAA ACTGGTCTTT
GGTCTTATGG GGATAACAGA TGTGAACTTT ATTTATCTTG AAGGACTGAA TATGGGAGAA
GAGTATGCCC AAACATCATG GCAACAAGCC CGAGAAAGTC TGACAACGCT GCTACCTGCA
ACCGTTTAA
 
Protein sequence
MKNVLVLNAS LQGENGNSSQ LTSEFVTQLQ QTESIKVEKV DLNTLNLPHL SAQEMQTWSM 
LSDNMTNDQA ALAAYSNELL AQLERSDVIV VGMPMYNFTI PSTFKAWIDR VARAGRTFSY
TSEGPKGHLQ GKTVYIFAAR GGIYQGTDND TQTPYLKLVF GLMGITDVNF IYLEGLNMGE
EYAQTSWQQA RESLTTLLPA TV