Gene Patl_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2492 
SymbolfadE 
ID4174246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp3023111 
End bp3025576 
Gene Length2466 bp 
Protein Length821 aa 
Translation table11 
GC content47% 
IMG OID638055508 
Productacyl-CoA dehydrogenase 
Protein accessionYP_662062 
Protein GI109898807 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000835865 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAACGT TATTATGGAC ACTTATTATT ATCGCCACCC TTGGTGCGGC GAGCTACTTT 
AGAATGAAAC TGATGAATGC CACTATCGCA GTGGCGGTTG CTATGTTGCT TGGCAGCATA
TTTGGCCCTG TGGGCGGAAT CGCTTGGCTG GTATTTTTAA TCATTGCTAT TCCACTGAAC
GTGGACTCTT TACGTAAGAA ATATCTTACA GCTCCGATTT TAGATACCTA CAAAAAAATT
ATGCCTGAGA TGTCAAGCAC CGAGCGCGAT GCCATCGACG CCGGTACAGT GTGGTGGGAC
GGTGAAATTT TCAGCGGCAA CCCGAATTGG CAAGCGTTAC ATAGTATCCC GCAAGCACGC
TTGACTGCAG AAGAACGCGA GTTTTTAGAT GGTCCAGTTG CGCAAGTATG CGAAATGGTC
AGTGATTGGG ATATTACTCA TAAAGACACA GACTTGACGC CTGAAGTATG GCAATTTCTC
AAAGATAATA AGTTCTTTGC GATGATCATC AAAAAGCAAT ACGGTGGCCT TGAGTTCTCA
GCCTATGCGC AATCCCGTGT GTTACAGAAA TTGTCGGGCG TCAGTGCGGT ATTATCTACC
ACCGTTGGTG TACCAAACTC CTTAGGTCCA GGTGAATTAC TTCAGCACTA TGGAACCAAA
GAACAACAGG ACCATTACTT GCCTCGCCTT GCAACAGGTG AAGAAATTCC CTGTTTCGCG
TTAACAGGCC CAGAGGCAGG TTCAGATGCT GGCTCGCTGC CTGACAGCGG TATTGTGTGC
AAAGGCGAGT GGGAAGGCAA AGAAGTCATT GGCCTGCGCT TAACATTTGA TAAGCGATAC
ATCACCCTTG CACCAGTCGC CACGGTTATC GGTCTTGCAT TTAAAATGTA TGACCCTGAA
GGACTGGTAG GCGACAAAAA AGATATTGGT ATTACATGCG CCCTACTACC ACGCGATACC
AAGGGGATGG AAATCGGTAA TCGTCATTTC CCTCTTAACG TTCCATTTCA AAATGGTCCC
ATCCGCGGAA ACGATATATT CGTCCCGCTT GATTACATCA TTGGCGGCGT AGAAATGGCC
GGTCAAGGCT GGCGTATGCT GGTTGAATGT TTATCCGTCG GTCGTTGTAT TACGCTACCT
TCAGCATCGG CAGGAGGGGC GAAAAGTATC GCTCTGGCTA CAGGGGCCTA CGCGCGTATA
CGCCGTCAAT TTAAAATGCC TGTCGGTAAG ATGGAAGGCG TAGAAGAAAT GCTAGCCAGT
ATTGGCGGTA ACGCTTATTT GATGGATGCC GTCACTAGCT TGACGACTAA AGCCGTAGAT
TTAGGTGAGA AACCGTCAGT TGTATCAGCG ATTTGTAAAT ACCACTTAAC CGAAAAAATG
CGCCAGTTAG TTAATGACGC TATGGACGTA CATGGTGGTA AAGGCGTTAT GCTTGGGCCA
AATAATTATT TGGGTCGAGG TTATCAAGGT GCGCCTATCG CCATCACGGT AGAAGGTGCC
AATATTCTTA CTCGTAATAT GATGATATAT GGCCAAGGCG CTATGCGTAG TCACCCTTTC
GTGCTTAAAG AGCTTTATGC GGCAAGTCAT GAGGACAAAG AGCAAGGCTT GAACGAGTTT
GACGATGCGG TATTTGGTCA CATCGGCTTC GCCATCAGTA ACACATTCAG AAGTATTTGG
TTCTCTCTCA CAGGGGCACG CCTGGCGGGT GCACCTTTCG ATGATGAAAC TGCTGGCTAC
TATCGTTCAT TGCAACGCTA CAGCAGCAAC TTGGCCTTGT TGTCTGATGT TTCTATGGCC
GTGCTCGGCG GTGAACTGAA ACGCCGTGAA CGTATATCAG CCCGTTTAGG TGATGTGTTA
AGCCATATCT ATTTAGCCTC TGCAGTACTG AAACGCTATG ATGACCAAGG CCGTTTGAAG
GAAGATTTGC CTTTAGTACA TTGGGCCATG CAAGACACCT TGTTCAAGCT AGAAACAGCC
CTAATCGAAT TGTTCGAGAA CTTCCCATCG GCAGTTTTGG GCGGGATGTT AAAAGGAATC
ATCATGCCGT TCGGCCGTTC ATACCGTCGT CCTTCGGATA AAATAGAACA TAAAATTGCA
GCTATTTTGC AAAGCCATAA TCCCTCACGA ACCCGTTTGG GCGAAGGGCA ACATTTCGGT
GGGAAAGATT GCTTGATGGG TGATTTAGAA CAGACACTGA AAGATGTGCT TGCAAGTGAG
CCCGTGTTCG ACAAAGTGTG TAAGGCAGCC AAAGAGCGTT ACCCTTTCAC TGGTCTTGAC
GTTATTGCAC AAAAAGGACT AGAACTAGGC GTAATCACTG AACAAGAAGC TGAATTACTT
GCCCGCACGG AAGCAGGCCG CTTACGTACA ATCAATGTGG ATGATTTTGA CCCGAAAGAG
TTGATCGCCA ATACACAGGC CGCCAAGCCT AAACGTCGTA CAACTAAGTC TTCAGAGGCC
GCTTAG
 
Protein sequence
MQTLLWTLII IATLGAASYF RMKLMNATIA VAVAMLLGSI FGPVGGIAWL VFLIIAIPLN 
VDSLRKKYLT APILDTYKKI MPEMSSTERD AIDAGTVWWD GEIFSGNPNW QALHSIPQAR
LTAEEREFLD GPVAQVCEMV SDWDITHKDT DLTPEVWQFL KDNKFFAMII KKQYGGLEFS
AYAQSRVLQK LSGVSAVLST TVGVPNSLGP GELLQHYGTK EQQDHYLPRL ATGEEIPCFA
LTGPEAGSDA GSLPDSGIVC KGEWEGKEVI GLRLTFDKRY ITLAPVATVI GLAFKMYDPE
GLVGDKKDIG ITCALLPRDT KGMEIGNRHF PLNVPFQNGP IRGNDIFVPL DYIIGGVEMA
GQGWRMLVEC LSVGRCITLP SASAGGAKSI ALATGAYARI RRQFKMPVGK MEGVEEMLAS
IGGNAYLMDA VTSLTTKAVD LGEKPSVVSA ICKYHLTEKM RQLVNDAMDV HGGKGVMLGP
NNYLGRGYQG APIAITVEGA NILTRNMMIY GQGAMRSHPF VLKELYAASH EDKEQGLNEF
DDAVFGHIGF AISNTFRSIW FSLTGARLAG APFDDETAGY YRSLQRYSSN LALLSDVSMA
VLGGELKRRE RISARLGDVL SHIYLASAVL KRYDDQGRLK EDLPLVHWAM QDTLFKLETA
LIELFENFPS AVLGGMLKGI IMPFGRSYRR PSDKIEHKIA AILQSHNPSR TRLGEGQHFG
GKDCLMGDLE QTLKDVLASE PVFDKVCKAA KERYPFTGLD VIAQKGLELG VITEQEAELL
ARTEAGRLRT INVDDFDPKE LIANTQAAKP KRRTTKSSEA A