Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2492 |
Symbol | fadE |
ID | 4174246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 3023111 |
End bp | 3025576 |
Gene Length | 2466 bp |
Protein Length | 821 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638055508 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_662062 |
Protein GI | 109898807 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000835865 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAACGT TATTATGGAC ACTTATTATT ATCGCCACCC TTGGTGCGGC GAGCTACTTT AGAATGAAAC TGATGAATGC CACTATCGCA GTGGCGGTTG CTATGTTGCT TGGCAGCATA TTTGGCCCTG TGGGCGGAAT CGCTTGGCTG GTATTTTTAA TCATTGCTAT TCCACTGAAC GTGGACTCTT TACGTAAGAA ATATCTTACA GCTCCGATTT TAGATACCTA CAAAAAAATT ATGCCTGAGA TGTCAAGCAC CGAGCGCGAT GCCATCGACG CCGGTACAGT GTGGTGGGAC GGTGAAATTT TCAGCGGCAA CCCGAATTGG CAAGCGTTAC ATAGTATCCC GCAAGCACGC TTGACTGCAG AAGAACGCGA GTTTTTAGAT GGTCCAGTTG CGCAAGTATG CGAAATGGTC AGTGATTGGG ATATTACTCA TAAAGACACA GACTTGACGC CTGAAGTATG GCAATTTCTC AAAGATAATA AGTTCTTTGC GATGATCATC AAAAAGCAAT ACGGTGGCCT TGAGTTCTCA GCCTATGCGC AATCCCGTGT GTTACAGAAA TTGTCGGGCG TCAGTGCGGT ATTATCTACC ACCGTTGGTG TACCAAACTC CTTAGGTCCA GGTGAATTAC TTCAGCACTA TGGAACCAAA GAACAACAGG ACCATTACTT GCCTCGCCTT GCAACAGGTG AAGAAATTCC CTGTTTCGCG TTAACAGGCC CAGAGGCAGG TTCAGATGCT GGCTCGCTGC CTGACAGCGG TATTGTGTGC AAAGGCGAGT GGGAAGGCAA AGAAGTCATT GGCCTGCGCT TAACATTTGA TAAGCGATAC ATCACCCTTG CACCAGTCGC CACGGTTATC GGTCTTGCAT TTAAAATGTA TGACCCTGAA GGACTGGTAG GCGACAAAAA AGATATTGGT ATTACATGCG CCCTACTACC ACGCGATACC AAGGGGATGG AAATCGGTAA TCGTCATTTC CCTCTTAACG TTCCATTTCA AAATGGTCCC ATCCGCGGAA ACGATATATT CGTCCCGCTT GATTACATCA TTGGCGGCGT AGAAATGGCC GGTCAAGGCT GGCGTATGCT GGTTGAATGT TTATCCGTCG GTCGTTGTAT TACGCTACCT TCAGCATCGG CAGGAGGGGC GAAAAGTATC GCTCTGGCTA CAGGGGCCTA CGCGCGTATA CGCCGTCAAT TTAAAATGCC TGTCGGTAAG ATGGAAGGCG TAGAAGAAAT GCTAGCCAGT ATTGGCGGTA ACGCTTATTT GATGGATGCC GTCACTAGCT TGACGACTAA AGCCGTAGAT TTAGGTGAGA AACCGTCAGT TGTATCAGCG ATTTGTAAAT ACCACTTAAC CGAAAAAATG CGCCAGTTAG TTAATGACGC TATGGACGTA CATGGTGGTA AAGGCGTTAT GCTTGGGCCA AATAATTATT TGGGTCGAGG TTATCAAGGT GCGCCTATCG CCATCACGGT AGAAGGTGCC AATATTCTTA CTCGTAATAT GATGATATAT GGCCAAGGCG CTATGCGTAG TCACCCTTTC GTGCTTAAAG AGCTTTATGC GGCAAGTCAT GAGGACAAAG AGCAAGGCTT GAACGAGTTT GACGATGCGG TATTTGGTCA CATCGGCTTC GCCATCAGTA ACACATTCAG AAGTATTTGG TTCTCTCTCA CAGGGGCACG CCTGGCGGGT GCACCTTTCG ATGATGAAAC TGCTGGCTAC TATCGTTCAT TGCAACGCTA CAGCAGCAAC TTGGCCTTGT TGTCTGATGT TTCTATGGCC GTGCTCGGCG GTGAACTGAA ACGCCGTGAA CGTATATCAG CCCGTTTAGG TGATGTGTTA AGCCATATCT ATTTAGCCTC TGCAGTACTG AAACGCTATG ATGACCAAGG CCGTTTGAAG GAAGATTTGC CTTTAGTACA TTGGGCCATG CAAGACACCT TGTTCAAGCT AGAAACAGCC CTAATCGAAT TGTTCGAGAA CTTCCCATCG GCAGTTTTGG GCGGGATGTT AAAAGGAATC ATCATGCCGT TCGGCCGTTC ATACCGTCGT CCTTCGGATA AAATAGAACA TAAAATTGCA GCTATTTTGC AAAGCCATAA TCCCTCACGA ACCCGTTTGG GCGAAGGGCA ACATTTCGGT GGGAAAGATT GCTTGATGGG TGATTTAGAA CAGACACTGA AAGATGTGCT TGCAAGTGAG CCCGTGTTCG ACAAAGTGTG TAAGGCAGCC AAAGAGCGTT ACCCTTTCAC TGGTCTTGAC GTTATTGCAC AAAAAGGACT AGAACTAGGC GTAATCACTG AACAAGAAGC TGAATTACTT GCCCGCACGG AAGCAGGCCG CTTACGTACA ATCAATGTGG ATGATTTTGA CCCGAAAGAG TTGATCGCCA ATACACAGGC CGCCAAGCCT AAACGTCGTA CAACTAAGTC TTCAGAGGCC GCTTAG
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Protein sequence | MQTLLWTLII IATLGAASYF RMKLMNATIA VAVAMLLGSI FGPVGGIAWL VFLIIAIPLN VDSLRKKYLT APILDTYKKI MPEMSSTERD AIDAGTVWWD GEIFSGNPNW QALHSIPQAR LTAEEREFLD GPVAQVCEMV SDWDITHKDT DLTPEVWQFL KDNKFFAMII KKQYGGLEFS AYAQSRVLQK LSGVSAVLST TVGVPNSLGP GELLQHYGTK EQQDHYLPRL ATGEEIPCFA LTGPEAGSDA GSLPDSGIVC KGEWEGKEVI GLRLTFDKRY ITLAPVATVI GLAFKMYDPE GLVGDKKDIG ITCALLPRDT KGMEIGNRHF PLNVPFQNGP IRGNDIFVPL DYIIGGVEMA GQGWRMLVEC LSVGRCITLP SASAGGAKSI ALATGAYARI RRQFKMPVGK MEGVEEMLAS IGGNAYLMDA VTSLTTKAVD LGEKPSVVSA ICKYHLTEKM RQLVNDAMDV HGGKGVMLGP NNYLGRGYQG APIAITVEGA NILTRNMMIY GQGAMRSHPF VLKELYAASH EDKEQGLNEF DDAVFGHIGF AISNTFRSIW FSLTGARLAG APFDDETAGY YRSLQRYSSN LALLSDVSMA VLGGELKRRE RISARLGDVL SHIYLASAVL KRYDDQGRLK EDLPLVHWAM QDTLFKLETA LIELFENFPS AVLGGMLKGI IMPFGRSYRR PSDKIEHKIA AILQSHNPSR TRLGEGQHFG GKDCLMGDLE QTLKDVLASE PVFDKVCKAA KERYPFTGLD VIAQKGLELG VITEQEAELL ARTEAGRLRT INVDDFDPKE LIANTQAAKP KRRTTKSSEA A
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