| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2477 |
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| Symbol | |
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| ID | 4174231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 3010424 |
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| End bp | 3011530 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 638055493 |
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| Product | NlpBDapX lipoprotein |
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| Protein accession | YP_662047 |
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| Protein GI | 109898792 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3317] Uncharacterized lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.893949 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACTA AGTTTTTCAT TGGCACAGCT ATCGCGGTTA GTGTTTTAAG CGCGTGTAGT
TCATTAGAAG AGCGACAAAT CGCCAGCGGT AATTTTGAAT ATACTAAGCA ACAGCCAGGT
CATGATATTC AAGTACCAGC CGATGTTGAC CGTCCTAATT TTAGTCAGGC TTATAAGCTT
CCTGCTTTGG ATGCTGATGC GCCGCGCAAT TTTATTGGCA AAAAGCTCAA GGTCGTTTCA
CCCGCGTTGG TGTTGCCTTT AGTCACTGGG TCTCATGTTG ATGATGGCAG TAAAGATGCT
AAGGTGTTTT TCGACCAAGT CGACGATAGT CAACCGCTAG ACACCACTAT TTGGAATTCT
CTGCTGAGTT ATCTAGAAGA GCAGGGCATT GGCATTGAAT CGTTCGATAA AGACAAACAG
CGCCTCGTTA CCGATTGGGT CGTGGCCAAA GAGATTTTAG ATGATCATTG GTATAGCTGG
TCATCTGTTG AGCGTGACAC CAGCCAACGC TTTGAATTTG ATTTAGAAAT GAAACCCCAC
GGACGTACGG CGACATTGAA CGCGCACCTA GTGGATTATA AAGAGCGTCA GGGGGAAGCG
GTTGTTGCTG AAAAATCTGA TGTAGATTCC CGCGCTAAAG AAGTCGACAT CTTGAATAAA
GTGATTGGTC ACTACGAATA CCAAATTCGA GTGGCTGATG CTAAGCGCCT ACGGGAAATT
CGCCGTGGTA TGCAAATTAC AATTGGCCAA GATGGCGAAG ATGCACCTGC GTTTATTATT
GACAGTAACT ACGACACAGC ATGGCCGCGC GTGCTATTGG TGTTGCGTAA ACTTGGTTTT
GACGTGAAAG ATTACGACAA ATCTAATGGT TTATTGTTTG TTAAGTACAA CGGTACCGAG
AGTGGTTGGT GGGATTCAGT TTGGTCTAAC GACGAAAATG CTTTACCGCT TGAAAAGCAA
GAGTATCGTT TTAGAGTAGA AGACGCGGGT GAGCATACCT CGTTAACTGT GCTTGATAAC
GAGAGCACGC CATTTACTAA AGATAAGTTA TCTGGTCTGT ATGATGTGTT TGCCCGAGTA
ATGGCTGACG ATAATTTAGA CATTTAA
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| Protein sequence | MTTKFFIGTA IAVSVLSACS SLEERQIASG NFEYTKQQPG HDIQVPADVD RPNFSQAYKL
PALDADAPRN FIGKKLKVVS PALVLPLVTG SHVDDGSKDA KVFFDQVDDS QPLDTTIWNS
LLSYLEEQGI GIESFDKDKQ RLVTDWVVAK EILDDHWYSW SSVERDTSQR FEFDLEMKPH
GRTATLNAHL VDYKERQGEA VVAEKSDVDS RAKEVDILNK VIGHYEYQIR VADAKRLREI
RRGMQITIGQ DGEDAPAFII DSNYDTAWPR VLLVLRKLGF DVKDYDKSNG LLFVKYNGTE
SGWWDSVWSN DENALPLEKQ EYRFRVEDAG EHTSLTVLDN ESTPFTKDKL SGLYDVFARV
MADDNLDI
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