| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2468 |
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| Symbol | |
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| ID | 4174222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2998117 |
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| End bp | 2999406 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638055484 |
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| Product | 3-phosphoshikimate 1-carboxyvinyltransferase |
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| Protein accession | YP_662038 |
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| Protein GI | 109898783 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0128] 5-enolpyruvylshikimate-3-phosphate synthase |
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| TIGRFAM ID | [TIGR01356] 3-phosphoshikimate 1-carboxyvinyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000499432 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGTCGTT CAGCTCCATT GTTACTCAAT CCCATTTCGG CGATTTCAGG CACAGTTAAC
GTGCCTGGCT CTAAAAGTTT GTCTAATCGT GCTTTATTGC TTGCCGCTGT AGCAAATGGT
GAAACGCATC TCACTAATTT ACTCGACAGT GAGGACATTC GCCACATGCT AAAAGCATTG
ACTCAACTGG GTGTAAACTA CCGCTTATCA GACGATAAGA CCGAGTGTTG GGTGCAAGGC
TTAGGTCGTG GTTTTAGTGT GGATAATCTA GAGACATTAT TTTTAGGCAA TGCAGGCACC
GCTATGCGTC CTTTATGTGC TGTATTAGCC ACCTCCATAG GTGAGTTTGA ATTAACGGGG
GAACCCCGGA TGGAAGAGCG CCCAATTGGC GCCTTAGTTG ATTCACTACG CCAAGCCGGT
GCTCAGATTA CCTATTTGAA AAATGAAGGC TATCCACCAT TAAAAATGAA GGGTATGGCG
TTAAAAGGCG GCAATATTAG TGTGGAAGGC GCGGTTTCTA GTCAGTTTTT AACCGCGTTA
CTCATGGCCG CGCCATTATT TGAACATGAC AGCGTTATCA ATATTGTCGG AGAGTTGGTA
TCGAAACCTT ATATAGACAT TACGCTTAAT ACCATGGCGC AATTTGGTAT AACCGTTGAA
AACAACAACT ACCAAAGCTT CACTGTCAAA GGTAACCAAC AGTACCAAGC TGCTGGCGAT
TTTTTGGTTG AAGGTGATGC CTCATCTGCA TCTTACTTTT TAGCCGCGGG TGCCATTAAA
GGCGGCACGG TGCGTGTTAC CGGCGTAGGA AAGAAGAGTA TTCAAGGGGA TATTCGTTTC
GCCGATGTGC TCGAAAAAAT GGGCGCGAAA ATCACATGGG GCGATGACTA TATTGAAGTC
ACAGGTGCAC CTTTGACTGC GGTCGATATG GACATGAACC ACATCCCTGA TGCAGCAATG
ACCATCGCAA CGACCGCATT ATTTGCCGAA GGCACCACGT CAATTCGTAA TATTTATAAT
TGGCGCGTCA AAGAAACAGA CAGATTAGCC GCTATGGCCT GTGAATTACG TAAAGTGGGT
GCAGAGGTTA TCGAAGGTCA AGATTACATC ACTATTACGC CTCCGAACAC GTTGATTCAA
ACTGATATCG ATACTTACGA TGATCACCGC GTAGCTATGT GTTTTTCACT TGTGGCATTG
AGCGATACAC CTGTGACGAT TAACGATCCT GACTGTACGG CTAAAACTTT CCCTGATTAC
TTCACTCGCC TAAAGCAAAT AAGCGCCTAA
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| Protein sequence | MSRSAPLLLN PISAISGTVN VPGSKSLSNR ALLLAAVANG ETHLTNLLDS EDIRHMLKAL
TQLGVNYRLS DDKTECWVQG LGRGFSVDNL ETLFLGNAGT AMRPLCAVLA TSIGEFELTG
EPRMEERPIG ALVDSLRQAG AQITYLKNEG YPPLKMKGMA LKGGNISVEG AVSSQFLTAL
LMAAPLFEHD SVINIVGELV SKPYIDITLN TMAQFGITVE NNNYQSFTVK GNQQYQAAGD
FLVEGDASSA SYFLAAGAIK GGTVRVTGVG KKSIQGDIRF ADVLEKMGAK ITWGDDYIEV
TGAPLTAVDM DMNHIPDAAM TIATTALFAE GTTSIRNIYN WRVKETDRLA AMACELRKVG
AEVIEGQDYI TITPPNTLIQ TDIDTYDDHR VAMCFSLVAL SDTPVTINDP DCTAKTFPDY
FTRLKQISA
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