Gene Patl_2467 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2467 
Symbol 
ID4174221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand- 
Start bp2997314 
End bp2997991 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content47% 
IMG OID638055483 
Productcytidylate kinase 
Protein accessionYP_662037 
Protein GI109898782 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0283] Cytidylate kinase 
TIGRFAM ID[TIGR00017] cytidylate kinase 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000550284 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTAT TTCCCGTCAT CACAGTAGAC GGCCCAAGTG GAGCTGGTAA GGGCACCGTG 
AGTACCTTAT TAGCCAATCG TTTAGGTTGG CACTTCCTCG ACAGCGGCGC GATCTATCGT 
GTTTTGGCTA TCGCCTCTAT CCATCATCAA ATTGATCCTA ATGACGAAGC AGGCCTATTG 
CCATTGGCTT CGGGCTTGGA TGTTAACTTT GAGCCAGCAG AGCATGGCTG TAAGGTGATT 
TTAGAAGGCG AAGATGTCAG TGATGACATT CGTACAGAAG AGGTCGGGGC AGTGGCCTCC 
AAAGTGGCGT CACTACCAAG TATTCGTGAG GCGTTACTGC GTCGCCAGCG AGCATTTAAA 
GAAGCGCCAG GTCTTGTCGC CGATGGACGT GACATGGGTA CCATTGTATT CCCTGAGGCA 
GATGTAAAGA TATTTCTTAC GGCGAGCGCC CAAGAGCGTG CTAGCCGTAG ATTTAATCAG 
TTGAAAGAAG CTGGTCATAA TGTTAGCATA TTGCGCCTTT TGGCTGACAT AGAGGCTCGT 
GACGAGCGCG ACTCAAATCG CAGCGTAGCG CCTTTAGTAC CAGCAAAAGA CGCGCTTATT 
GTTGATTCTA CTGAATTAAC AATAACGCAA GTAATTGATA AGATTACTGA ATTTGCTAGT 
TCTAAAATCG AAATCTGA
 
Protein sequence
MQLFPVITVD GPSGAGKGTV STLLANRLGW HFLDSGAIYR VLAIASIHHQ IDPNDEAGLL 
PLASGLDVNF EPAEHGCKVI LEGEDVSDDI RTEEVGAVAS KVASLPSIRE ALLRRQRAFK 
EAPGLVADGR DMGTIVFPEA DVKIFLTASA QERASRRFNQ LKEAGHNVSI LRLLADIEAR 
DERDSNRSVA PLVPAKDALI VDSTELTITQ VIDKITEFAS SKIEI