Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Patl_2462 |
Symbol | |
ID | 4174216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudoalteromonas atlantica T6c |
Kingdom | Bacteria |
Replicon accession | NC_008228 |
Strand | + |
Start bp | 2991575 |
End bp | 2992705 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 638055478 |
Product | alanine dehydrogenase |
Protein accession | YP_662032 |
Protein GI | 109898777 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0686] Alanine dehydrogenase |
TIGRFAM ID | [TIGR00518] alanine dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.000000220592 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAATTG GTGTACCAAA AGAAATTAAA AACCACGAAT ATCGCGTAGG TCTTACGCCT GCTGCAGTTA AAGAGTTTGT TGTTCATGGA CATCAAGTAC TAATTGAAGA TAATGCGGGT ACCGCTATTG GCTTTACCAA TGAAGAGTTT ATTGCTGCCG GTGCTGAAAT AGTGCCTGAT GCAGCAACCG TTTTTGCCAA AGCTGAGATG ATTGTAAAGG TTAAAGAGCC GCAAGAAAAT GAATGCAAAA TGCTGCGCAA AGGCCAAACC TTGTATACCT ATTTGCACCT TGCCCCCGAT CCTAAACAGA CCGAGCTACT AATTGAATCT GGCGCAACCT GCATTGCCTA TGAAACAGTA ACTGATAACC GCAACGCCCT GCCCCTTCTT GCACCAATGA GTGAAGTTGC TGGTCGTATG GCGGTACAAG CTGGCGCGCA CTATCTTGAA AAAGCACAAG GTGGTAGTGG TACATTGTTG GGTGGTGTGC CAGGGGTAGC TCCGGGTAAA GTGCTAATTA TCGGTGGCGG TGTTGTAGGC ACCAATTCAG CTAAGATGGC GTTGGGCCTT GGTGCTGATG TTACCATTTT GGATCGCTCT TTACCGCGCT TACGTGAGTT AGATGATATT TTTGATGGCC GTGTTAAAAC CGTTTTTTCA ACAGTTGATG CTATTGAGCA TTATTCGTCA AAAGCTGACT TAGTGGTGGG TGCAGTACTC ATTCCTGGCG CTGCAGCACC TAAACTATTG ACCGCAGAAC ATGTTAAAAA CATGAAAGAG GGCTCAGTAG TGGTTGATGT CGCTATTGAT CAAGGTGGTT GTTTTGAAAC CTCAAAAGCG ACGACACATC AAGATCCGGT TTATATCGTA GATGGTGTTG TTCATTATTG CGTAGCAAAC ATGCCGGGCG GTGTTGCGCG TACATCCACT ATGGCACTGA ACAACGCAAC GCTACCTTTC GGTTTAGCTT TGGCTAACAA AGGGCCTAAG CAGGCTATGT TAGATGATGC GCATTTGCTT AACGGCTTGA ATGTGCATGA AGGTAAAGTT ACTTACAAAG CGGTAGTTGA TGCACTCGGA AAATCTTTAG GGTTGACCTA CACCGATCCT AAAACGGCAC TGAGTGCCTA A
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Protein sequence | MLIGVPKEIK NHEYRVGLTP AAVKEFVVHG HQVLIEDNAG TAIGFTNEEF IAAGAEIVPD AATVFAKAEM IVKVKEPQEN ECKMLRKGQT LYTYLHLAPD PKQTELLIES GATCIAYETV TDNRNALPLL APMSEVAGRM AVQAGAHYLE KAQGGSGTLL GGVPGVAPGK VLIIGGGVVG TNSAKMALGL GADVTILDRS LPRLRELDDI FDGRVKTVFS TVDAIEHYSS KADLVVGAVL IPGAAAPKLL TAEHVKNMKE GSVVVDVAID QGGCFETSKA TTHQDPVYIV DGVVHYCVAN MPGGVARTST MALNNATLPF GLALANKGPK QAMLDDAHLL NGLNVHEGKV TYKAVVDALG KSLGLTYTDP KTALSA
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