Gene Patl_2462 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2462 
Symbol 
ID4174216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand
Start bp2991575 
End bp2992705 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content46% 
IMG OID638055478 
Productalanine dehydrogenase 
Protein accessionYP_662032 
Protein GI109898777 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0686] Alanine dehydrogenase 
TIGRFAM ID[TIGR00518] alanine dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000220592 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATTG GTGTACCAAA AGAAATTAAA AACCACGAAT ATCGCGTAGG TCTTACGCCT 
GCTGCAGTTA AAGAGTTTGT TGTTCATGGA CATCAAGTAC TAATTGAAGA TAATGCGGGT
ACCGCTATTG GCTTTACCAA TGAAGAGTTT ATTGCTGCCG GTGCTGAAAT AGTGCCTGAT
GCAGCAACCG TTTTTGCCAA AGCTGAGATG ATTGTAAAGG TTAAAGAGCC GCAAGAAAAT
GAATGCAAAA TGCTGCGCAA AGGCCAAACC TTGTATACCT ATTTGCACCT TGCCCCCGAT
CCTAAACAGA CCGAGCTACT AATTGAATCT GGCGCAACCT GCATTGCCTA TGAAACAGTA
ACTGATAACC GCAACGCCCT GCCCCTTCTT GCACCAATGA GTGAAGTTGC TGGTCGTATG
GCGGTACAAG CTGGCGCGCA CTATCTTGAA AAAGCACAAG GTGGTAGTGG TACATTGTTG
GGTGGTGTGC CAGGGGTAGC TCCGGGTAAA GTGCTAATTA TCGGTGGCGG TGTTGTAGGC
ACCAATTCAG CTAAGATGGC GTTGGGCCTT GGTGCTGATG TTACCATTTT GGATCGCTCT
TTACCGCGCT TACGTGAGTT AGATGATATT TTTGATGGCC GTGTTAAAAC CGTTTTTTCA
ACAGTTGATG CTATTGAGCA TTATTCGTCA AAAGCTGACT TAGTGGTGGG TGCAGTACTC
ATTCCTGGCG CTGCAGCACC TAAACTATTG ACCGCAGAAC ATGTTAAAAA CATGAAAGAG
GGCTCAGTAG TGGTTGATGT CGCTATTGAT CAAGGTGGTT GTTTTGAAAC CTCAAAAGCG
ACGACACATC AAGATCCGGT TTATATCGTA GATGGTGTTG TTCATTATTG CGTAGCAAAC
ATGCCGGGCG GTGTTGCGCG TACATCCACT ATGGCACTGA ACAACGCAAC GCTACCTTTC
GGTTTAGCTT TGGCTAACAA AGGGCCTAAG CAGGCTATGT TAGATGATGC GCATTTGCTT
AACGGCTTGA ATGTGCATGA AGGTAAAGTT ACTTACAAAG CGGTAGTTGA TGCACTCGGA
AAATCTTTAG GGTTGACCTA CACCGATCCT AAAACGGCAC TGAGTGCCTA A
 
Protein sequence
MLIGVPKEIK NHEYRVGLTP AAVKEFVVHG HQVLIEDNAG TAIGFTNEEF IAAGAEIVPD 
AATVFAKAEM IVKVKEPQEN ECKMLRKGQT LYTYLHLAPD PKQTELLIES GATCIAYETV
TDNRNALPLL APMSEVAGRM AVQAGAHYLE KAQGGSGTLL GGVPGVAPGK VLIIGGGVVG
TNSAKMALGL GADVTILDRS LPRLRELDDI FDGRVKTVFS TVDAIEHYSS KADLVVGAVL
IPGAAAPKLL TAEHVKNMKE GSVVVDVAID QGGCFETSKA TTHQDPVYIV DGVVHYCVAN
MPGGVARTST MALNNATLPF GLALANKGPK QAMLDDAHLL NGLNVHEGKV TYKAVVDALG
KSLGLTYTDP KTALSA