Gene Patl_2451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPatl_2451 
Symbol 
ID4174205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudoalteromonas atlantica T6c 
KingdomBacteria 
Replicon accessionNC_008228 
Strand+ 
Start bp2982284 
End bp2982952 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content43% 
IMG OID638055467 
Producthypothetical protein 
Protein accessionYP_662021 
Protein GI109898766 
COG category[R] General function prediction only 
COG ID[COG0670] Integral membrane protein, interacts with FtsH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones0 
Plasmid unclonability p-value0.00000005036 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACATC GTACTACGTA TAGCAATACT GCTCAGGGTT CTGCCCTGCA AACTAACAAG 
GTCTTGCGCA ATACGTACCT ACTATTGGCA ATGACTCTGA CATTTAGCGC AGTGTGTGCT 
GGTATAGCTG CTGCAATGAA TATCGGCCCA GGTGCTGCGT TAGGTATGAA CCTTGCCGCA 
TTGGTTATGA TTTTCTTTTT AAATAAAGCA TCACAAAGTT CAATGGGCAT TTTATTCGTA 
TTTGCCTTTA CCGGTTTATT AGGTGGCTCT TTGGGTTACA CCCTAAATTA CTATGCTGGC 
TTCCAAAATG GTCCTGAAAT GATTATGCAG GCCTTTGGCG CAACCGCGTT AGTGTTCTTT 
GGTTTATCCG GTTATGTTTT AACAACGAAG AAAGACTTCT CTTTCATGGG TGGTTTTTTA 
ATCGTCGGCT TAATCGTGGC GGTTGTTGCG TCTCTAGCTA ACCTATTTTT CCAAATCCCT 
GCGCTTAGCT TGGCCGTCAG TGCTGCTATC GTGTTTATTA TGTCTGGCTT CATCTTGTTT 
GATACTAGCC GTATCATCAA CGGTGGCGAA ACCAACTATA TTCGCGCGAC AGTTTCAATG 
TACTTGAATA TATATAACTT GTTCACATCG ATCCTTCACC TACTAGGTGC TTTCGGTGGC 
GATGATTAA
 
Protein sequence
MEHRTTYSNT AQGSALQTNK VLRNTYLLLA MTLTFSAVCA GIAAAMNIGP GAALGMNLAA 
LVMIFFLNKA SQSSMGILFV FAFTGLLGGS LGYTLNYYAG FQNGPEMIMQ AFGATALVFF 
GLSGYVLTTK KDFSFMGGFL IVGLIVAVVA SLANLFFQIP ALSLAVSAAI VFIMSGFILF 
DTSRIINGGE TNYIRATVSM YLNIYNLFTS ILHLLGAFGG DD