| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Patl_2449 |
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| Symbol | uvrC |
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| ID | 4174201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudoalteromonas atlantica T6c |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008228 |
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| Strand | - |
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| Start bp | 2977774 |
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| End bp | 2979600 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638055463 |
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| Product | excinuclease ABC subunit C |
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| Protein accession | YP_662019 |
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| Protein GI | 109898764 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0322] Nuclease subunit of the excinuclease complex |
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| TIGRFAM ID | [TIGR00194] excinuclease ABC, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0823614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGACA CTATCGAGTT TGATTCTAAA GCGTTTCTCA AGGATCTCAC TAATCAACCG
GGCGTTTACC GCATGTACAA TCACAAGCAG GATGTGATTT ACGTGGGGAA GGCTAAAAAT
CTCAAAAATC GCGTATCTAG CTATTTTCGT AGTCAAGTTG ATAGCATCAA GACTCAGTCT
TTGGTGAAGC AAATTGCACA CATGGATGTC ACTGTCGTGC ACAGTGAAGC GGAAGCTTTC
ATTCTTGAGA ACAATTTTAT CAAGAAATAT AAGCCCCGCT ATAACGTGCT GCTGCGAGAT
GATAAGTCTT ATCCGTTTAT CTTTTTATCA GACCACCAAC ATCCCCGCTT AGCCAATCAT
CGTGGCCCTA AAAAGCGCAA AGGTGAGTAC TTTGGCCCGT ATCCAAGTGC TTGGGCCGTG
CGCGAAAGTT TGCGCACAAT GCAGCGAATT TTTCCTATTC GCCAATGTGA AGACAGCTAT
TATCGGGCGC GTTCAAGACC CTGCTTACAA TATCAACTGC AACGTTGCGC CGGACCATGT
GTTGAAGGGC TAGTGAGTGA TGAGGACTAC CAAGCGCAAG TAGATTTAGC GCGCATGTTT
CTTAAAGGTA AGAACAAGCA GGTAATTGAC TCTTTGGTGC AGCATATGGA GCGCGCAAGC
ACGGATTTGC GCTTTGAAGC TGCAGCGCGC TATCGCGATC AGATAAGTGC GCTAAATAAA
GTGCAAGAGC AACAGTGGGT CAGTGGTAAC CAAGAAGAAA TGGACGTGTT TGGTTTTGCT
TACCGTAATG GCATTGCCAG TATTCAAGGC CTGTTTATTC GCGACAATAA ACTGTTAGGC
AGCAAAAGCT TCTACCCCAA AGTGCCTGCT GAGGCTACTG ACGAGGAAGT GTTTCAGTCT
TTTATCCTAC AATTTTACTT AGCAGGCAAC AAAGTTATCC CTAAGCAAAT TGTTACGCCA
CTGGAATTAA ACGAACAGGG CGCAATAGAA GAGTTATTGA CCAAAGAAGC AGGGCGTCGT
ATTCAGTTTT ATCGCGGTGC CAGAGATGAA AAGCGCCGCT ATTTAGATTT AGCCAATACC
AATGCCGAAA ATGCATTGAT TGCGAAGCAG GGCCAGCAAA AATCGGTATT TGCACGCTAT
ACCGAATTAG AAAAAATACT TGAGTTTGAG CAACCCATTC AGCGCATGGA ATGTTTTGAT
ATCAGTCACA CTTCGGGTCA GTTAACGGTG GCCTCATGCG TGGTATTCAA TCGTGAAGGG
CCGTTTAAAG CAGATTATCG CCGTTTTAAT ATTGAAGGCA TTACCCCAGG GGATGACTAT
GCCGCTATGG CGCAAGCGTT AGCAAGGCGA TATCGCGATG TAAAAGACGA CAGTAAAATA
CCGGATATCC TATTCATCGA TGGCGGTAAA GGTCAATTGA CCCAAGCTGA GGACTACTTT
GAAGATTGGA AACACGAGAA GAAACCTTTA CTGATAGGTG TCGCGAAAGG CAGTAGCCGC
AAGGCAGGAT TGGAAACGCT TATTTTGGCT GGCAACCATG CTACTATCCC GTTATCTGGT
GACTCCATCG CGCTGCACCT TATTCAGCAT ATTCGTGACG AGTCTCATCG ATTTGCGATT
ACCGGGCACA GAGCGCGGCG TCAAAAGGAC AAAAAGACCT CTAAGTTGGA ATCCATTCCA
GGCGTGGGGG CAAAGCGTCG TCAAAGTTTG TTGAAATATA TGGGCGGTTT GCAGGGGATC
TTGCAAGCCA GTCGCAGTGA AATCGCCAAT GTGCCAGGGA TCAGCGCAGA ACTAGCGGAT
ACGATTTATG ACCATATCCA CAATTAA
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| Protein sequence | MSDTIEFDSK AFLKDLTNQP GVYRMYNHKQ DVIYVGKAKN LKNRVSSYFR SQVDSIKTQS
LVKQIAHMDV TVVHSEAEAF ILENNFIKKY KPRYNVLLRD DKSYPFIFLS DHQHPRLANH
RGPKKRKGEY FGPYPSAWAV RESLRTMQRI FPIRQCEDSY YRARSRPCLQ YQLQRCAGPC
VEGLVSDEDY QAQVDLARMF LKGKNKQVID SLVQHMERAS TDLRFEAAAR YRDQISALNK
VQEQQWVSGN QEEMDVFGFA YRNGIASIQG LFIRDNKLLG SKSFYPKVPA EATDEEVFQS
FILQFYLAGN KVIPKQIVTP LELNEQGAIE ELLTKEAGRR IQFYRGARDE KRRYLDLANT
NAENALIAKQ GQQKSVFARY TELEKILEFE QPIQRMECFD ISHTSGQLTV ASCVVFNREG
PFKADYRRFN IEGITPGDDY AAMAQALARR YRDVKDDSKI PDILFIDGGK GQLTQAEDYF
EDWKHEKKPL LIGVAKGSSR KAGLETLILA GNHATIPLSG DSIALHLIQH IRDESHRFAI
TGHRARRQKD KKTSKLESIP GVGAKRRQSL LKYMGGLQGI LQASRSEIAN VPGISAELAD
TIYDHIHN
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